SMTL ID : 1b05.1

Structure of oligo-peptide binding protein complexed with LYS-CYS-LYS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x LYS- CYS- LYS: PEPTIDE LYS-CYS-LYS(Non-covalent)

LYS-CYS-LYS.1: 16 residues within 4Å: Chain A: E.32, G.33, V.34, S.37, Y.109, Y.245, N.246, N.247, Y.269, W.397, R.413, G.415, W.416, C.417, A.418, D.419 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:V.34, A:Y.269 Hydrogen bonds: A:E.32, A:V.34, A:Y.109, A:N.246, A:G.415, A:G.415, A:C.417, A:D.419 Water bridges: A:N.247, A:G.415, A:G.415, A:A.418, A:Y.485, A:L.504, A:N.506, A:N.506 Salt bridges: A:R.413

8 x U1: URANIUM ATOM(Non-covalent)(Non-functional Binders)

U1.2: 1 residues within 4Å: Chain A: D.323 No protein-ligand interaction detected (PLIP) U1.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) U1.4: 1 residues within 4Å: Chain A: D.459 No protein-ligand interaction detected (PLIP) U1.5: 3 residues within 4Å: Chain A: E.251, D.369, K.373 No protein-ligand interaction detected (PLIP) U1.6: 2 residues within 4Å: Chain A: D.362, D.410 No protein-ligand interaction detected (PLIP) U1.7: 1 residues within 4Å: Chain A: H.517 No protein-ligand interaction detected (PLIP) U1.8: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) U1.9: 1 residues within 4Å: Chain A: D.11 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sleigh, S.H. et al., Crystallographic and calorimetric analysis of peptide binding to OppA protein. J.Mol.Biol. (1999)

Release Date

1998-11-25

Peptides

PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN

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