SMTL ID : 1bab.1

HEMOGLOBIN THIONVILLE: AN ALPHA-CHAIN VARIANT WITH A SUBSTITUTION OF A GLUTAMATE FOR VALINE AT NA-1 AND HAVING AN ACETYLATED METHIONINE NH2 TERMINUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: Y.44, F.45, H.47, F.48, H.60, K.63, V.64, A.67, L.85, L.88, H.89, L.93, V.95, N.99, F.100, L.103, L.138 25 PLIP interactions: 25 interactions with chain A, Hydrophobic interactions: A:Y.44, A:F.45, A:F.45, A:F.45, A:K.63, A:K.63, A:V.64, A:A.67, A:L.85, A:L.88, A:L.93, A:L.93, A:V.95, A:V.95, A:F.100, A:F.100, A:L.103, A:L.138 Water bridges: A:K.92, A:K.92 Salt bridges: A:H.47, A:K.63, A:K.63 pi-Stacking: A:H.60 Metal complexes: A:H.89 HEM.3: 18 residues within 4Å: Chain B: L.31, F.41, F.42, H.63, K.66, V.67, A.70, F.85, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, V.137, L.141 20 PLIP interactions: 20 interactions with chain B, Hydrophobic interactions: B:L.31, B:F.41, B:F.41, B:F.42, B:F.42, B:K.66, B:V.67, B:F.85, B:L.88, B:L.91, B:L.96, B:L.96, B:V.98, B:N.102, B:L.106, B:V.137, B:L.141 Salt bridges: B:K.66 pi-Stacking: B:H.63 Metal complexes: B:H.92 HEM.4: 17 residues within 4Å: Chain C: M.34, Y.44, F.45, H.47, F.48, H.60, K.63, A.67, L.85, L.88, H.89, L.93, V.95, N.99, F.100, L.103, L.138 17 PLIP interactions: 17 interactions with chain C, Hydrophobic interactions: C:F.45, C:A.67, C:L.85, C:L.88, C:L.93, C:L.93, C:V.95, C:V.95, C:F.100, C:F.100, C:L.138 Water bridges: C:K.63 Salt bridges: C:H.47, C:K.63, C:K.63 pi-Stacking: C:H.60 Metal complexes: C:H.89 HEM.6: 14 residues within 4Å: Chain D: L.31, F.41, F.42, H.63, V.67, A.70, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 17 PLIP interactions: 17 interactions with chain D, Hydrophobic interactions: D:L.31, D:F.41, D:F.41, D:F.42, D:F.42, D:V.67, D:L.91, D:L.96, D:L.96, D:V.98, D:V.98, D:N.102, D:F.103, D:L.141 Salt bridges: D:K.66 pi-Stacking: D:H.63 Metal complexes: D:H.92

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain B: V.1, L.78, D.79, N.80, L.81, K.82 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:V.1, B:D.79, B:L.81, B:K.82 Salt bridges: B:K.82 SO4.5: 6 residues within 4Å: Chain D: V.1, L.78, D.79, N.80, L.81, K.82 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:V.1, D:V.1, D:L.81, D:K.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vasseur, C. et al., Hemoglobin Thionville. An alpha-chain variant with a substitution of a glutamate for valine at NA-1 and having an acetylated methionine NH2 terminus. J.Biol.Chem. (1992)

Release Date

1994-01-31

Peptides

HEMOGLOBIN THIONVILLE (DEOXY) (ALPHA CHAIN): AC
HEMOGLOBIN THIONVILLE (DEOXY) (BETA CHAIN): BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

HEMOGLOBIN THIONVILLE (DEOXY) (ALPHA CHAIN)

HEMOGLOBIN THIONVILLE (DEOXY) (BETA CHAIN)

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