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SMTL ID : 1hgb.1

HIGH RESOLUTION CRYSTAL STRUCTURES AND COMPARISONS OF T STATE DEOXYHAEMOGLOBIN AND TWO LIGANDED T-STATE HAEMOGLOBINS: T(ALPHA-OXY)HAEMOGLOBIN AND T(MET)HAEMOGLOBIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1:	16 residues within 4Å: Chain A: Y.42, F.43, H.45, F.46, H.58, K.61, A.65, L.83, H.87, L.91, V.93, N.97, F.98, L.101, V.132, L.136 16 PLIP interactions: 15 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:F.43, A:A.65, A:L.83, A:L.91, A:L.91, A:V.93, A:F.98, A:L.101, A:V.132, A:L.136 Water bridges: A:K.61 Salt bridges: A:H.45, A:H.58 pi-Stacking: A:H.58 Metal complexes: A:H.87, H₂O.1
HEM.2:	16 residues within 4Å: Chain B: L.31, F.41, F.42, H.63, K.66, V.67, A.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 21 PLIP interactions: 20 interactions with chain B, 1 Ligand-Water interactions Hydrophobic interactions: B:L.31, B:F.41, B:F.41, B:F.42, B:F.42, B:F.42, B:V.67, B:A.70, B:L.88, B:L.91, B:L.96, B:L.96, B:V.98, B:V.98, B:N.102, B:L.141 Water bridges: B:H.63, B:K.66 pi-Stacking: B:H.63 Metal complexes: B:H.92, H₂O.4
HEM.3:	21 residues within 4Å: Chain C: M.32, T.39, Y.42, F.43, H.45, F.46, H.58, K.61, V.62, A.65, L.66, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, V.132, L.136 22 PLIP interactions: 21 interactions with chain C, 1 Ligand-Water interactions Hydrophobic interactions: C:Y.42, C:F.43, C:F.43, C:K.61, C:K.61, C:V.62, C:L.66, C:L.83, C:L.86, C:L.91, C:L.91, C:V.93, C:V.93, C:N.97, C:F.98, C:V.132 Salt bridges: C:H.45, C:K.61 pi-Stacking: C:H.58, C:H.58 Metal complexes: C:H.87, H₂O.5
HEM.4:	16 residues within 4Å: Chain D: T.38, F.41, F.42, H.63, V.67, A.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, V.137, L.141 19 PLIP interactions: 18 interactions with chain D, 1 Ligand-Water interactions Hydrophobic interactions: D:F.41, D:F.41, D:F.42, D:F.42, D:V.67, D:V.67, D:A.70, D:L.88, D:L.88, D:L.91, D:L.96, D:V.98, D:V.98, D:N.102, D:V.137, D:L.141 pi-Stacking: D:H.63 Metal complexes: D:H.92, H₂O.8

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Liddington, R. et al., High resolution crystal structures and comparisons of T-state deoxyhaemoglobin and two liganded T-state haemoglobins: T(alpha-oxy)haemoglobin and T(met)haemoglobin. J.Mol.Biol. (1992)

Release Date

1994-01-31

Peptides

HEMOGLOBIN (AQUO MET) (ALPHA CHAIN): AC
HEMOGLOBIN (AQUO MET) (BETA CHAIN): BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

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NGLPV2D

HEMOGLOBIN (AQUO MET) (ALPHA CHAIN)

Toggle Identical (AC)

HEMOGLOBIN (AQUO MET) (BETA CHAIN)

Toggle Identical (BD)

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