SMTL ID : 1cq6.1

ASPARTATE AMINOTRANSFERASE COMPLEX WITH C4-PYRIDOXAL-5P-PHOSPHATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x PY4: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO- BUTYRIC ACID(Non-covalent)

PY4.1: 16 residues within 4Å: Chain A: I.13, G.34, G.102, G.103, T.104, W.130, N.183, D.211, A.213, Y.214, S.243, S.245, R.254, F.348, R.374 Chain B: Y.65 17 PLIP interactions: 15 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:W.130, A:N.183, B:Y.65 Hydrogen bonds: A:G.34, A:G.103, A:T.104, A:T.104, A:N.183, A:Y.214, A:Y.214, A:S.243, A:S.245, B:Y.65 Salt bridges: A:K.246, A:R.254, A:R.374 pi-Stacking: A:W.130 PY4.2: 16 residues within 4Å: Chain A: Y.65 Chain B: I.13, G.34, G.102, G.103, T.104, W.130, N.183, D.211, A.213, Y.214, S.243, S.245, R.254, F.348, R.374 17 PLIP interactions: 14 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:W.130, B:N.183, A:Y.65 Hydrogen bonds: B:G.34, B:G.103, B:T.104, B:N.183, B:Y.214, B:S.243, B:S.245, A:Y.65, A:Y.65 Water bridges: B:Y.214 Salt bridges: B:K.246, B:R.254, B:R.374 pi-Stacking: B:W.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ishijima, J. et al., Free energy requirement for domain movement of an enzyme. J.Biol.Chem. (2000)

Release Date

2000-12-20

Peptides

ASPARTATE AMINOTRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ASPARTATE AMINOTRANSFERASE

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