- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 9 x SO4: SULFATE ION(Non-functional Binders)
- 3 x FE: FE (III) ION(Non-covalent)
FE.2: 4 residues within 4Å:- Chain A: N.201, H.208, H.213, D.362
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.208, A:H.213, A:D.362, A:D.362, H2O.17
FE.8: 4 residues within 4Å:- Chain C: N.201, H.208, H.213, D.362
5 PLIP interactions:4 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:H.208, C:H.213, C:D.362, C:D.362, H2O.41
FE.14: 4 residues within 4Å:- Chain E: N.201, H.208, H.213, D.362
5 PLIP interactions:4 interactions with chain E, 1 Ligand-Water interactions- Metal complexes: E:H.208, E:H.213, E:D.362, E:D.362, H2O.64
- 3 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.3: 10 residues within 4Å:- Chain A: C.81, H.83, R.84, G.85, K.86, C.101, Y.103, H.104, G.105, W.106
4 PLIP interactions:4 interactions with chain A,- Metal complexes: A:C.81, A:H.83, A:C.101, A:H.104
FES.9: 10 residues within 4Å:- Chain C: C.81, H.83, R.84, G.85, K.86, C.101, Y.103, H.104, G.105, W.106
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.81, C:H.83, C:C.101, C:H.104
FES.15: 10 residues within 4Å:- Chain E: C.81, H.83, R.84, G.85, K.86, C.101, Y.103, H.104, G.105, W.106
4 PLIP interactions:4 interactions with chain E,- Metal complexes: E:C.81, E:H.83, E:C.101, E:H.104
- 3 x IND: INDOLE(Non-covalent)
IND.4: 7 residues within 4Å:- Chain A: N.201, D.205, H.208, V.209, H.295, N.297, L.307
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:V.209, A:N.297, A:L.307
- Hydrogen bonds: A:N.201, A:N.297
- pi-Stacking: A:H.208
IND.10: 7 residues within 4Å:- Chain C: N.201, D.205, H.208, V.209, H.295, N.297, L.307
6 PLIP interactions:6 interactions with chain C- Hydrophobic interactions: C:V.209, C:N.297, C:L.307
- Hydrogen bonds: C:N.201, C:N.297
- pi-Stacking: C:H.208
IND.16: 7 residues within 4Å:- Chain E: N.201, D.205, H.208, V.209, H.295, N.297, L.307
6 PLIP interactions:6 interactions with chain E- Hydrophobic interactions: E:V.209, E:N.297, E:L.307
- Hydrogen bonds: E:N.201, E:N.297
- pi-Stacking: E:H.208
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Carredano, E. et al., Substrate binding site of naphthalene 1,2-dioxygenase: functional implications of indole binding. J.Mol.Biol. (2000)
- Release Date
- 2000-05-24
- Peptides
- PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT): ACE
PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT): BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 9 x SO4: SULFATE ION(Non-functional Binders)
- 3 x FE: FE (III) ION(Non-covalent)
- 3 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 3 x IND: INDOLE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Carredano, E. et al., Substrate binding site of naphthalene 1,2-dioxygenase: functional implications of indole binding. J.Mol.Biol. (2000)
- Release Date
- 2000-05-24
- Peptides
- PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT): ACE
PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT): BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B