- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- hetero-oligomer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x 4NC: 4-NITROCATECHOL(Non-covalent)
4NC.2: 14 residues within 4Å:- Chain A: T.16, G.18, P.19, R.142
- Chain B: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.1
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:Y.148, B:W.150, B:R.158, B:I.192, A:P.19
- Hydrogen bonds: B:R.158, B:Q.178
4NC.4: 14 residues within 4Å:- Chain C: T.16, G.18, P.19, R.142
- Chain D: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.3
7 PLIP interactions:1 interactions with chain C, 6 interactions with chain D- Hydrophobic interactions: C:P.19, D:Y.148, D:W.150, D:R.158, D:I.192
- Hydrogen bonds: D:R.158, D:Q.178
4NC.6: 14 residues within 4Å:- Chain E: T.16, G.18, P.19, R.142
- Chain F: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.5
7 PLIP interactions:1 interactions with chain E, 6 interactions with chain F- Hydrophobic interactions: E:P.19, F:Y.148, F:W.150, F:R.158, F:I.192
- Hydrogen bonds: F:R.158, F:Q.178
4NC.8: 14 residues within 4Å:- Chain G: T.16, G.18, P.19, R.142
- Chain H: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.7
7 PLIP interactions:6 interactions with chain H, 1 interactions with chain G- Hydrophobic interactions: H:Y.148, H:W.150, H:R.158, H:I.192, G:P.19
- Hydrogen bonds: H:R.158, H:Q.178
4NC.10: 14 residues within 4Å:- Chain I: T.16, G.18, P.19, R.142
- Chain J: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.9
7 PLIP interactions:6 interactions with chain J, 1 interactions with chain I- Hydrophobic interactions: J:Y.148, J:W.150, J:R.158, J:I.192, I:P.19
- Hydrogen bonds: J:R.158, J:Q.178
4NC.12: 14 residues within 4Å:- Chain K: T.16, G.18, P.19, R.142
- Chain L: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.11
7 PLIP interactions:6 interactions with chain L, 1 interactions with chain K- Hydrophobic interactions: L:Y.148, L:W.150, L:R.158, L:I.192, K:P.19
- Hydrogen bonds: L:R.158, L:Q.178
4NC.14: 14 residues within 4Å:- Chain M: T.16, G.18, P.19, R.142
- Chain N: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.13
7 PLIP interactions:1 interactions with chain M, 6 interactions with chain N- Hydrophobic interactions: M:P.19, N:Y.148, N:W.150, N:R.158, N:I.192
- Hydrogen bonds: N:R.158, N:Q.178
4NC.16: 14 residues within 4Å:- Chain O: T.16, G.18, P.19, R.142
- Chain P: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.15
10 PLIP interactions:9 interactions with chain P, 1 interactions with chain O- Hydrophobic interactions: P:Y.148, P:W.150, P:R.158, P:I.192, O:P.19
- Hydrogen bonds: P:Y.109, P:R.158, P:H.161, P:H.161, P:Q.178
4NC.18: 14 residues within 4Å:- Chain Q: T.16, G.18, P.19, R.142
- Chain R: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.17
7 PLIP interactions:6 interactions with chain R, 1 interactions with chain Q- Hydrophobic interactions: R:Y.148, R:W.150, R:R.158, R:I.192, Q:P.19
- Hydrogen bonds: R:R.158, R:Q.178
4NC.20: 14 residues within 4Å:- Chain S: T.16, G.18, P.19, R.142
- Chain T: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.19
7 PLIP interactions:6 interactions with chain T, 1 interactions with chain S- Hydrophobic interactions: T:Y.148, T:W.150, T:R.158, T:I.192, S:P.19
- Hydrogen bonds: T:R.158, T:Q.178
4NC.22: 14 residues within 4Å:- Chain U: T.16, G.18, P.19, R.142
- Chain V: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.21
7 PLIP interactions:6 interactions with chain V, 1 interactions with chain U- Hydrophobic interactions: V:Y.148, V:W.150, V:R.158, V:I.192, U:P.19
- Hydrogen bonds: V:R.158, V:Q.178
4NC.24: 14 residues within 4Å:- Chain W: T.16, G.18, P.19, R.142
- Chain X: Y.25, Y.109, Y.148, W.150, R.158, H.161, H.163, Q.178, I.192
- Ligands: FE.23
7 PLIP interactions:6 interactions with chain X, 1 interactions with chain W- Hydrophobic interactions: X:Y.148, X:W.150, X:R.158, X:I.192, W:P.19
- Hydrogen bonds: X:R.158, X:Q.178
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vetting, M.W. et al., Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase. Biochemistry (2000)
- Release Date
- 2000-08-09
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
AQ
AS
AU
AW
AB
BD
BF
BH
BJ
BL
BN
BP
BR
BT
BV
BX
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- hetero-oligomer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x 4NC: 4-NITROCATECHOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vetting, M.W. et al., Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase. Biochemistry (2000)
- Release Date
- 2000-08-09
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
AQ
AS
AU
AW
AB
BD
BF
BH
BJ
BL
BN
BP
BR
BT
BV
BX
B