SMTL ID : 1fv1.1 (1 other biounit)

STRUCTURAL BASIS FOR THE BINDING OF AN IMMUNODOMINANT PEPTIDE FROM MYELIN BASIC PROTEIN IN DIFFERENT REGISTERS BY TWO HLA-DR2 ALLELES

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.123, N.124, K.126 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.123, A:N.124 Salt bridges: A:K.126 SO4.2: 2 residues within 4Å: Chain B: R.29, R.39 6 PLIP interactions: 6 interactions with chain B Water bridges: B:R.39, B:R.39, B:R.39, B:R.39 Salt bridges: B:R.29, B:R.39

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain B: R.94, S.179 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Structural basis for the binding of an immunodominant peptide from myelin basic protein in different registers by two HLA-DR2 proteins. J.Mol.Biol. (2000)

Release Date

2000-09-27

Peptides

MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN: A
MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN: B
MYELIN BASIC PROTEIN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN

MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN

MYELIN BASIC PROTEIN

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