SMTL ID : 2seb.1

X-RAY CRYSTAL STRUCTURE OF HLA-DR4 COMPLEXED WITH A PEPTIDE FROM HUMAN COLLAGEN II

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: V.116, N.118, E.166, H.167, W.168 Chain B: D.2 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:W.168 Hydrogen bonds: A:N.118, A:N.118, A:W.168, B:D.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dessen, A. et al., X-ray crystal structure of HLA-DR4 (DRA*0101, DRB1*0401) complexed with a peptide from human collagen II. Immunity (1997)

Release Date

1998-01-28

Peptides

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN: B
ENTEROTOXIN TYPE B: C
PEPTIDE FROM COLLAGEN II: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

D
E

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN

ENTEROTOXIN TYPE B

PEPTIDE FROM COLLAGEN II

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