SMTL ID : 1fyt.1

CRYSTAL STRUCTURE OF A COMPLEX OF A HUMAN ALPHA/BETA-T CELL RECEPTOR, INFLUENZA HA ANTIGEN PEPTIDE, AND MHC CLASS II MOLECULE, HLA-DR1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: R.76, S.77, N.78 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.76, A:N.78 NAG.2: 4 residues within 4Å: Chain A: N.118, E.166, H.167, W.168 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hennecke, J. et al., Structure of a covalently stabilized complex of a human alphabeta T-cell receptor, influenza HA peptide and MHC class II molecule, HLA-DR1. EMBO J. (2000)

Release Date

2000-11-08

Peptides

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN: B
HEMAGGLUTININ HA1 PEPTIDE CHAIN: C
T-CELL RECEPTOR ALPHA CHAIN: D
T-CELL RECEPTOR BETA CHAIN: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN

HEMAGGLUTININ HA1 PEPTIDE CHAIN

T-CELL RECEPTOR ALPHA CHAIN

T-CELL RECEPTOR BETA CHAIN

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