SMTL ID : 1me6.3 (2 other biounits)

CRYSTAL STRUCTURE OF PLASMEPSIN II, AN ASPARTYL PROTEASE FROM PLASMODIUM FALCIPARUM, IN COMPLEX WITH A STATINE-BASED INHIBITOR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x IVS: 3-HYDROXY-6-METHYL-4-(3-METHYL-2-(3-METHYL-2-(3-METHYL-BUTYRYLAMINO)-BUTYRYLAMINO)-BUTYRYLAMINO)-HEPTANOIC ACID ETHYL ESTER(Non-covalent)

IVS.1: 17 residues within 4Å: Chain A: M.15, D.34, G.36, S.37, N.76, Y.77, V.78, S.79, I.123, D.214, G.216, T.217, S.218, A.219, I.290 Chain B: F.241, L.242 18 PLIP interactions: 15 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:Y.77, A:Y.77, A:V.78, A:V.78, A:I.123, A:A.219, A:I.290, B:F.241, B:F.241, B:L.242 Hydrogen bonds: A:G.36, A:V.78, A:S.79, A:S.79, A:S.79, A:T.217, A:S.218, A:S.218 IVS.2: 19 residues within 4Å: Chain A: F.241, L.242 Chain B: D.34, G.36, N.76, Y.77, V.78, S.79, F.111, I.123, Y.192, D.214, G.216, T.217, S.218, A.219, I.290, L.292, I.300 16 PLIP interactions: 1 interactions with chain A, 15 interactions with chain B Hydrophobic interactions: A:F.241, B:Y.77, B:V.78, B:F.111, B:I.123, B:A.219, B:L.292, B:I.300 Hydrogen bonds: B:G.36, B:V.78, B:S.79, B:S.79, B:S.79, B:T.217, B:S.218, B:S.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Freire, E. et al., CRYSTAL STRUCTURE OF PLASMEPSIN II, AN ASPARTYL PROTEASE FROM PLASMODIUM FALCIPARUM, IN COMPLEX WITH A STATINE-BASED INHIBITOR. TO BE PUBLISHED

Release Date

2004-01-20

Peptides

Plasmepsin II: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Plasmepsin II

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