SMTL ID : 1msm.1

The HIV protease (mutant Q7K L33I L63I) complexed with KNI-764 (an inhibitor)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x JE2: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide(Non-covalent)

JE2.1: 28 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.30, V.32, I.47, G.48, G.49, I.50, L.76, P.81, V.82, I.84 Chain B: L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, I.84 21 PLIP interactions: 8 interactions with chain B, 13 interactions with chain A Hydrophobic interactions: B:L.23, B:A.28, B:D.29, B:V.32, A:L.23, A:A.28, A:D.30, A:V.32, A:I.47, A:I.47, A:L.76, A:P.81, A:V.82, A:I.84 Hydrogen bonds: B:D.25, B:G.27, B:D.30, B:D.30 Water bridges: A:G.27, A:I.50, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vega, S. et al., A structural and thermodynamic escape mechanism from a drug resistant mutation of the HIV-1 protease. Proteins (2004)

Release Date

2003-11-04

Peptides

POL polyprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

POL polyprotein

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