SMTL ID : 1njs.1 (1 other biounit)

human GAR Tfase in complex with hydrolyzed form of 10-trifluoroacetyl-5,10-dideaza-acyclic-5,6,7,8-tetrahydrofolic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: T.10, G.11, S.12, N.13, K.170 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.10, A:G.11, A:S.12, A:S.12, A:N.13, A:N.13 Water bridges: A:L.14, A:G.87 Salt bridges: A:K.170 PO4.2: 2 residues within 4Å: Chain A: K.157, R.168 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.157, A:R.168

1 x KEU: N-{4-[(1R)-4-[(2R,4R,5S)-2,4-DIAMINO-6-OXOHEXAHYDROPYRIMIDIN-5-YL]-1-(2,2,2-TRIFLUORO-1,1-DIHYDROXYETHYL)BUTYL]BENZOYL}-D-GLUTAMIC ACID(Non-covalent)

KEU.3: 20 residues within 4Å: Chain A: R.64, L.85, F.88, M.89, R.90, I.91, L.92, V.97, N.106, H.108, P.109, G.117, S.118, H.137, V.139, A.140, E.141, D.142, V.143, D.144 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:L.85, A:I.91, A:V.139, A:V.143 Hydrogen bonds: A:M.89, A:M.89, A:R.90, A:I.91, A:L.92, A:L.92, A:L.92, A:N.106, A:H.108, A:G.117, A:D.144 Water bridges: A:A.140, A:A.140 Salt bridges: A:R.64, A:R.90 Halogen bonds: A:F.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Rational Design, Synthesis, Evaluation, and Crystal Structure of a Potent Inhibitor of Human GAR Tfase: 10-(Trifluoroacetyl)-5,10-dideazaacyclic-5,6,7,8-tetrahydrofolic Acid. Biochemistry (2003)

Release Date

2003-06-10

Peptides

Phosphoribosylglycinamide formyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoribosylglycinamide formyltransferase

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