SMTL ID : 1rby.2 (3 other biounits)

Human GAR Tfase complex structure with 10-(trifluoroacetyl)-5,10-dideazaacyclic-5,6,7,8-tetrahydrofolic acid and substrate beta-GAR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x KEU: N-{4-[(1R)-4-[(2R,4R,5S)-2,4-DIAMINO-6-OXOHEXAHYDROPYRIMIDIN-5-YL]-1-(2,2,2-TRIFLUORO-1,1-DIHYDROXYETHYL)BUTYL]BENZOYL}-D-GLUTAMIC ACID(Non-covalent)

KEU.1: 21 residues within 4Å: Chain A: R.64, L.85, F.88, M.89, R.90, I.91, L.92, V.97, N.106, H.108, P.109, G.117, S.118, H.137, V.139, A.140, E.141, D.142, V.143, D.144 Ligands: GAR.2 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.85, A:I.91, A:I.91, A:V.139 Hydrogen bonds: A:M.89, A:M.89, A:R.90, A:I.91, A:L.92, A:L.92, A:L.92, A:N.106, A:H.108, A:G.117, A:D.144 Water bridges: A:S.118, A:A.140, A:A.145 Salt bridges: A:R.64, A:R.90 Halogen bonds: A:F.88

1 x GAR: GLYCINAMIDE RIBONUCLEOTIDE(Non-covalent)

GAR.2: 17 residues within 4Å: Chain A: G.9, T.10, G.11, S.12, N.13, L.85, A.86, G.87, F.88, M.89, N.106, I.107, H.108, P.109, K.170, E.173 Ligands: KEU.1 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.11, A:S.12, A:S.12, A:N.13, A:N.13, A:A.86, A:G.87, A:F.88, A:N.106, A:I.107, A:E.173, A:E.173 Water bridges: A:T.10, A:L.14 Salt bridges: A:K.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Human GAR Tfase complex structure. To be Published

Release Date

2005-06-14

Peptides

PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE

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