SMTL ID : 1s6p.1

CRYSTAL STRUCTURE OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R100943

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.443, D.498, N.545, D.549 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.443, A:D.443, A:D.498, A:D.549, H2O.1

1 x IET: 1-(4-CYANO-PHENYL)-3-[2-(2,6-DICHLORO-PHENYL)-1-IMINO-ETHYL]-THIOUREA(Non-covalent)

IET.2: 13 residues within 4Å: Chain A: L.100, K.101, K.103, V.106, V.179, Y.181, Y.188, G.190, F.227, L.234, H.235, P.236, Y.318 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.106, A:Y.181, A:Y.181, A:Y.188, A:Y.188, A:Y.318 Hydrogen bonds: A:K.101, A:K.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, K. et al., Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants. J.Med.Chem. (2004)

Release Date

2004-05-11

Peptides

POL polyprotein [Contains: Reverse transcriptase]: A
POL polyprotein [Contains: Reverse transcriptase]: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

POL polyprotein [Contains: Reverse transcriptase]

POL polyprotein [Contains: Reverse transcriptase]

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