SMTL ID : 2b5j.1

Crystal structure of HIV-1 reverse transcriptase (RT) in complex with JANSSEN-R165481

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.443, G.444, E.478, D.498 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.443, A:E.478, A:D.498, A:D.498, H2O.1

1 x 3AC: (2E)-3-{3-[(5-ETHYL-3-IODO-6-METHYL-2-OXO-1,2-DIHYDROPYRIDIN-4-YL)OXY]PHENYL}ACRYLONITRILE(Non-covalent)

3AC.2: 13 residues within 4Å: Chain A: L.100, K.101, K.103, V.106, V.108, Y.188, V.189, G.190, F.227, W.229, L.234, H.235, Y.318 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.100, A:L.100, A:L.100, A:V.108, A:Y.188, A:Y.188, A:Y.188, A:F.227, A:W.229, A:L.234, A:Y.318 Hydrogen bonds: A:K.101, A:K.101 pi-Stacking: A:W.229, A:W.229 Halogen bonds: A:Y.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Himmel, D.M. et al., Crystal Structures for HIV-1 Reverse Transcriptase in Complexes with Three Pyridinone Derivatives: A New Class of Non-Nucleoside Inhibitors Effective against a Broad Range of Drug-Resistant Strains. J.Med.Chem. (2005)

Release Date

2005-12-06

Peptides

Reverse transcriptase P66 SUBUNIT: A
Reverse transcriptase P51 SUBUNIT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase P66 SUBUNIT

Reverse transcriptase P51 SUBUNIT

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