SMTL ID : 1suq.1

CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R185545

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.443, D.498, N.545 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.443, A:D.443, A:D.498

1 x 185: (6-[4-(AMINOMETHYL)-2,6-DIMETHYLPHENOXY]-2-{[4-(AMINOMETHYL)PHENYL]AMINO}-5-BROMOPYRIMIDIN-4-YL)METHANOL(Non-covalent)

185.2: 14 residues within 4Å: Chain A: L.100, K.101, K.103, V.106, V.179, Y.188, V.189, G.190, F.227, L.234, H.235, P.236, Y.318 Chain B: E.138 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.100, A:V.106, A:V.106, A:Y.188, A:Y.188, A:L.234, A:Y.318 Hydrogen bonds: A:K.101, A:K.101, A:K.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, K. et al., Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants. J.Med.Chem. (2004)

Release Date

2004-05-11

Peptides

REVERSE TRANSCRIPTASE: A
REVERSE TRANSCRIPTASE: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

REVERSE TRANSCRIPTASE

REVERSE TRANSCRIPTASE

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