SMTL ID : 2eb8.1

Crystal Structure of Cu(II)(Sal-Phe)/apo-Myoglobin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

5 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: R.46, K.64, H.94 Ligands: PO4.3 5 PLIP interactions: 5 interactions with chain A Water bridges: A:H.94, A:H.94 Salt bridges: A:R.46, A:K.64, A:H.94 PO4.2: 2 residues within 4Å: Chain A: K.17, H.120 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.119 Water bridges: A:R.119 Salt bridges: A:K.17, A:H.120 PO4.3: 7 residues within 4Å: Chain A: R.46, K.64, H.65, T.68, S.93, A.95 Ligands: PO4.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.68, A:H.94 Water bridges: A:D.61, A:T.68, A:T.68 Salt bridges: A:R.46, A:K.64, A:H.65 PO4.4: 2 residues within 4Å: Chain A: H.114, S.118 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.118, A:S.118 Water bridges: A:R.32, A:H.114 Salt bridges: A:H.114 PO4.5: 1 residues within 4Å: Chain A: H.94 2 PLIP interactions: 2 interactions with chain A Water bridges: A:H.94 Salt bridges: A:H.94

1 x CUP: (N-SALICYLIDEN-L-PHENYLALANATO)-COPPER(II)(Non-covalent)

CUP.6: 13 residues within 4Å: Chain A: L.33, F.44, H.65, V.69, A.91, Q.92, S.93, T.96, I.100, Y.104, L.105, I.108, F.139 10 PLIP interactions: 10 interactions with chain A, Hydrophobic interactions: A:L.33, A:F.44, A:I.100, A:Y.104, A:L.105, A:I.108, A:F.139 Hydrogen bonds: A:S.93 Salt bridges: A:H.65 Metal complexes: A:H.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abe, S. et al., Design and Structure Analysis of Artificial Metalloproteins: Selective Coordination of His64 to Copper Complexes with Square-Planar Structure in the apo-Myoglobin Scaffold. Inorg.Chem. (2007)

Release Date

2007-07-03

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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