SMTL ID : 2hg1.2 (1 other biounit)

N-Domain Of Grp94 In Complex With the Novel Ligand N-(2-hydroxyl)ethyl Carboxyamido Adenosine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: D.154 No protein-ligand interaction detected (PLIP)

1 x N5O: 5'-N-(2-HYDROXYL)ETHYL CARBOXYAMIDO ADENOSINE(Non-covalent)

N5O.2: 11 residues within 4Å: Chain A: N.43, A.47, D.85, M.90, N.98, L.99, G.132, V.133, F.135, Y.136, T.181 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.43, A:D.85, A:N.98, A:N.98, A:T.181 Water bridges: A:K.50, A:K.50, A:N.98, A:T.101, A:G.132, A:Y.136

4 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.3: 6 residues within 4Å: Chain A: T.148, R.173, T.176, T.182, T.184 Ligands: PG4.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.173, A:R.173 Water bridges: A:T.184 PG4.4: 5 residues within 4Å: Chain A: K.73, H.82, T.84, W.218 Ligands: PG4.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.73, A:T.84 PG4.5: 7 residues within 4Å: Chain A: A.63, G.64, N.65, E.66, N.175, T.176, G.178 No protein-ligand interaction detected (PLIP) PG4.6: 3 residues within 4Å: Chain A: D.198, T.199, N.202 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.202

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.7: 4 residues within 4Å: Chain A: N.19, K.23, I.26, S.163 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.23 Water bridges: A:K.23, A:S.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Immormino, R.M. et al., N-Domain Of Grp94 In Complex With the Novel Ligand N-(2-hydroxyl)ethyl Carboxyamido Adenosine. To be Published

Release Date

2007-06-05

Peptides

Endoplasmin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Endoplasmin

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