SMTL ID : 2j34.1

CRYSTAL STRUCTURE OF A HUMAN FACTOR XA INHIBITOR COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GS6: 6-CHLORO-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}-1-BENZOTHIOPHENE-2-SULFONAMIDE(Non-covalent)

GS6.1: 17 residues within 4Å: Chain A: K.82, E.83, T.84, Y.85, F.162, D.179, A.180, Q.182, S.185, V.203, W.205, G.206, G.208, C.209, G.216, I.217, Y.218 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.162, A:V.203, A:W.205 Hydrogen bonds: A:G.206 Water bridges: A:S.185

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.56, N.58, Q.61, E.63, E.66 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.63, A:E.66, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Senger, S. et al., Arylsulfonamides: A Study of the Relationship between Activity and Conformational Preferences for a Series of Factor Xa Inhibitors. Bioorg.Med.Chem.Lett. (2006)

Release Date

2006-09-27

Peptides

ACTIVATED FACTOR XA HEAVY CHAIN: A
FACTOR X LIGHT CHAIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ACTIVATED FACTOR XA HEAVY CHAIN

FACTOR X LIGHT CHAIN

Related Entries With Identical Sequence