SMTL ID : 2o01.1

The Structure of a plant photosystem I supercomplex at 3.4 Angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

168 x CLA: CHLOROPHYLL A(Non-covalent)(Non-functional Binders)(Covalent)

CLA.1: 4 residues within 4Å: Chain A: I.50, H.54 Chain J: P.12 Ligands: CLA.2 2 PLIP interactions: 2 interactions with chain A, pi-Stacking: A:H.54 Metal complexes: A:H.54 CLA.2: 5 residues within 4Å: Chain A: L.53, A.57, H.58 Ligands: CLA.1, CLA.24 4 PLIP interactions: 4 interactions with chain A, Hydrophobic interactions: A:L.53, A:A.57 pi-Stacking: A:H.58, A:H.58 CLA.3: 17 residues within 4Å: Chain A: H.58, F.60, V.74, A.77, H.78, Q.81, L.82, W.350, H.351, L.354, N.357, L.358, L.361 Ligands: CLA.4, CLA.11, CLA.20, CLA.24 13 PLIP interactions: 13 interactions with chain A, Hydrophobic interactions: A:F.60, A:F.60, A:V.74, A:V.74, A:Q.81, A:L.82, A:W.350, A:L.354 Hydrogen bonds: A:N.357 Salt bridges: A:H.78 pi-Cation interactions: A:H.78, A:H.78 Metal complexes: A:H.78 CLA.4: 5 residues within 4Å: Chain A: Q.81, I.84, I.85 Ligands: CLA.3, CLA.24 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:I.84, A:I.85, A:I.85 CLA.5: 7 residues within 4Å: Chain A: L.87, S.90, G.91, F.94, H.95 Ligands: CLA.6, CLA.7 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:F.94 pi-Stacking: A:H.95 Metal complexes: A:H.95 CLA.6: 11 residues within 4Å: Chain A: A.116, Q.117, I.139, I.141, T.142, A.670, Y.671, W.743 Ligands: CLA.5, CLA.7, CLA.22 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:I.139, A:A.670, A:Y.671, A:W.743 Hydrogen bonds: A:T.142 CLA.7: 10 residues within 4Å: Chain A: Q.117, W.120, Q.125, L.128, L.673 Chain B: V.441, F.445 Chain J: I.27 Ligands: CLA.5, CLA.6 9 PLIP interactions: 4 interactions with chain A, 3 interactions with chain B, 2 interactions with chain J, Hydrophobic interactions: A:W.120, A:L.128, A:L.673, B:V.441, B:F.445, B:F.445, J:I.27, J:I.27 Hydrogen bonds: A:Q.117 CLA.8: 10 residues within 4Å: Chain A: N.200, H.201, L.307, I.308, G.310, H.311, Y.313, T.315, I.319 Ligands: CLA.10 9 PLIP interactions: 9 interactions with chain A, Hydrophobic interactions: A:L.307, A:L.307, A:I.308, A:I.319, A:I.319 pi-Stacking: A:H.311, A:H.311, A:H.311 Metal complexes: A:H.311 CLA.9: 8 residues within 4Å: Chain A: F.27, Q.29, K.73, S.76, A.77, G.178, Y.182, H.183 3 PLIP interactions: 3 interactions with chain A, pi-Stacking: A:Y.182, A:Y.182 pi-Cation interactions: A:H.183 CLA.10: 2 residues within 4Å: Ligands: CLA.8, CLA.37 0 PLIP interactions: CLA.11: 6 residues within 4Å: Chain A: H.78, M.198, H.202, L.206 Ligands: CLA.3, CLA.20 2 PLIP interactions: 2 interactions with chain A, Hydrophobic interactions: A:M.198 pi-Stacking: A:H.202 CLA.12: 10 residues within 4Å: Chain A: L.212, A.215, G.216, H.220, I.245, L.246, R.248, A.259, Y.273, L.300 9 PLIP interactions: 9 interactions with chain A, Hydrophobic interactions: A:A.215, A:I.245, A:R.248, A:A.259, A:Y.273, A:L.300 Salt bridges: A:R.248 pi-Cation interactions: A:H.220, A:H.220 CLA.13: 8 residues within 4Å: Chain A: F.265, W.270, A.274, L.277, H.297, A.301 Ligands: CLA.29, CLA.114 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:W.270 pi-Cation interactions: A:H.297, A:H.297 CLA.14: 5 residues within 4Å: Chain A: F.279, D.294, H.298, H.371 Ligands: CLA.15 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:F.279, A:H.298 pi-Stacking: A:H.298, A:H.298, A:H.298 CLA.15: 4 residues within 4Å: Chain A: W.214, H.298, H.299 Ligands: CLA.14 4 PLIP interactions: 4 interactions with chain A, pi-Stacking: A:H.299, A:H.299, A:H.299, A:H.299 CLA.16: 1 residues within 4Å: Chain A: W.191 1 PLIP interactions: 1 interactions with chain A, Hydrophobic interactions: A:W.191 CLA.17: 7 residues within 4Å: Chain A: L.199, M.312, Y.313, I.356 Ligands: CLA.18, CLA.19, CLA.20 1 PLIP interactions: 1 interactions with chain A, Hydrophobic interactions: A:I.356 CLA.18: 4 residues within 4Å: Chain A: M.312, H.321 Ligands: CLA.17, CLA.41 0 PLIP interactions: CLA.19: 10 residues within 4Å: Chain A: L.327, H.330, T.335, H.339, L.342, L.427 Ligands: CLA.17, CLA.20, CLA.25, CLA.41 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:T.335, A:L.342, A:L.427 Salt bridges: A:H.330 pi-Stacking: A:H.339 CLA.20: 14 residues within 4Å: Chain A: V.195, M.198, L.199, H.202, L.342, L.346, I.356, N.357, M.360, L.361 Ligands: CLA.3, CLA.11, CLA.17, CLA.19 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:V.195, A:L.199, A:L.342, A:I.356, A:M.360 CLA.21: 5 residues within 4Å: Chain A: S.363, I.366, I.403 Ligands: CLA.30, CLA.32 2 PLIP interactions: 2 interactions with chain A, Hydrophobic interactions: A:I.366, A:I.403 CLA.22: 15 residues within 4Å: Chain A: W.88, T.142, S.143, S.390, T.393, H.394, W.397, I.398, F.674, I.739, W.743, F.746 Ligands: CLA.6, CLA.23, BCR.46 13 PLIP interactions: 13 interactions with chain A, Hydrophobic interactions: A:H.394, A:W.397, A:W.397, A:I.398, A:F.674, A:I.739, A:W.743, A:W.743, A:F.746 pi-Stacking: A:H.394, A:W.743 pi-Cation interactions: A:H.394 Metal complexes: A:H.394 CLA.23: 10 residues within 4Å: Chain A: W.88, I.148, L.364, T.365, V.368, M.372, H.394, H.395, I.398 Ligands: CLA.22 8 PLIP interactions: 8 interactions with chain A, Hydrophobic interactions: A:I.148, A:T.365, A:V.368, A:V.368 pi-Stacking: A:H.394, A:H.395, A:H.395 Metal complexes: A:H.395 CLA.24: 18 residues within 4Å: Chain A: H.54, A.55, D.56, H.58, D.59, H.351, L.354, L.358, L.402, G.405, R.416, F.573, W.591, L.598 Ligands: CLA.2, CLA.3, CLA.4, CLA.33 14 PLIP interactions: 14 interactions with chain A, Hydrophobic interactions: A:H.58, A:D.59, A:L.354, A:L.358, A:L.402, A:F.573, A:L.598 Hydrogen bonds: A:H.58, A:D.59 Salt bridges: A:H.58, A:H.351, A:R.416 pi-Stacking: A:H.409 pi-Cation interactions: A:H.409 CLA.25: 12 residues within 4Å: Chain A: F.334, T.335, L.427, R.430, H.434, I.438, H.441 Chain L: T.21, P.22 Ligands: CLA.19, CLA.32, CLA.118 9 PLIP interactions: 8 interactions with chain A, 1 interactions with chain L, Hydrophobic interactions: A:F.334, A:F.334, A:T.335, A:L.427, A:I.438, L:P.22 Salt bridges: A:R.430 pi-Cation interactions: A:H.434, A:H.434 CLA.26: 10 residues within 4Å: Chain A: W.444, I.447, F.448, F.451, H.452 Chain L: P.63 Ligands: CLA.27, CLA.31, CLA.86, BCR.122 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain L, Hydrophobic interactions: A:W.444, A:F.448, A:F.448, A:F.451, L:P.63 pi-Cation interactions: A:H.452 CLA.27: 13 residues within 4Å: Chain A: H.452, G.455, L.456, I.458, H.459, T.462, M.463, F.473 Chain L: A.67, G.68 Ligands: CLA.26, CLA.57, BCR.110 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain L, Hydrophobic interactions: A:L.456, A:I.458, L:A.67 pi-Stacking: A:H.459, A:H.459, A:H.459, A:H.459, A:F.473 CLA.28: 4 residues within 4Å: Chain A: I.488, T.491, H.492 Ligands: CLA.29 4 PLIP interactions: 4 interactions with chain A, Hydrophobic interactions: A:I.488, A:T.491 pi-Stacking: A:H.492 pi-Cation interactions: A:H.492 CLA.29: 6 residues within 4Å: Chain A: T.499, A.500, P.501 Ligands: CLA.13, CLA.28, CLA.115 1 PLIP interactions: 1 interactions with chain A, Hydrophobic interactions: A:T.499 CLA.30: 15 residues within 4Å: Chain A: I.366, Q.370, Y.373, F.392, M.396, W.487, Q.489, H.492, I.528, H.538, V.608, F.612 Ligands: CLA.21, CLA.31, CLA.32 10 PLIP interactions: 10 interactions with chain A, Hydrophobic interactions: A:I.366, A:Y.373, A:F.392, A:I.528, A:V.608, A:F.612 Hydrogen bonds: A:Q.370, A:Q.489 pi-Stacking: A:H.538, A:H.538 CLA.31: 12 residues within 4Å: Chain A: F.448, L.449, F.484, D.534, F.535, H.539, A.542, H.546 Ligands: CLA.26, CLA.30, CLA.32, CLA.121 9 PLIP interactions: 9 interactions with chain A, Hydrophobic interactions: A:F.448, A:L.449, A:L.449, A:F.484, A:A.542 pi-Stacking: A:H.539, A:H.539, A:H.539 Metal complexes: A:H.539 CLA.32: 10 residues within 4Å: Chain A: L.442, A.542, I.545, H.546 Ligands: CLA.21, CLA.25, CLA.30, CLA.31, CLA.118, CLA.121 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:L.442 Salt bridges: A:H.546 pi-Stacking: A:H.546, A:H.546, A:H.546 CLA.33: 14 residues within 4Å: Chain A: W.51, F.680, V.681, F.684, F.688, L.721, Q.725, A.728, V.729, T.732, H.733 Ligands: CLA.24, PQN.45, BCR.46 14 PLIP interactions: 14 interactions with chain A, Hydrophobic interactions: A:W.51, A:F.680, A:V.681, A:F.684, A:F.684, A:F.684, A:F.688, A:L.721, A:V.729 Hydrogen bonds: A:T.732 pi-Stacking: A:H.733, A:H.733 pi-Cation interactions: A:H.733 Metal complexes: A:H.733 CLA.34: 1 residues within 4Å: Chain A: I.308 1 PLIP interactions: 1 interactions with chain A, Hydrophobic interactions: A:I.308 CLA.35: 2 residues within 4Å: Chain A: F.265, F.266 0 PLIP interactions: CLA.36: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.37: 3 residues within 4Å: Chain A: L.206, L.209 Ligands: CLA.10 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:L.206, A:L.209, A:L.209 CLA.38: 2 residues within 4Å: Chain A: C.162, H.242 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:H.242 pi-Stacking: A:H.242, A:H.242, A:H.242 Metal complexes: A:H.242 CLA.39: 4 residues within 4Å: Chain A: S.213, W.214, H.217, V.221 7 PLIP interactions: 7 interactions with chain A, Hydrophobic interactions: A:H.217, A:V.221 pi-Stacking: A:W.214, A:W.214, A:H.217, A:H.217, A:H.217 CLA.40: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.41: 2 residues within 4Å: Ligands: CLA.18, CLA.19 2 PLIP interactions: 2 interactions with chain A, pi-Cation interactions: A:H.330, A:H.330 CLA.42: 19 residues within 4Å: Chain A: Y.602, N.603, S.606, W.648, A.657, I.661, H.679, W.682, Y.734, G.738, T.741, T.742, F.745 Chain B: L.619, L.623, W.624 Ligands: CLA.48, CLA.49, CLA.50 13 PLIP interactions: 11 interactions with chain A, 2 interactions with chain B, Hydrophobic interactions: A:W.648, A:A.657, A:I.661, A:W.682, A:F.745, B:L.619, B:L.623 Hydrogen bonds: A:Y.602, A:Y.734 pi-Stacking: A:H.679, A:H.679, A:W.682 Metal complexes: A:H.679 CLA.43: 15 residues within 4Å: Chain A: F.680, A.683, F.684, L.686, M.687, F.690, W.696 Chain B: L.426, G.429, F.430, T.528, L.577, F.580, W.581 Ligands: CLA.49 13 PLIP interactions: 9 interactions with chain B, 4 interactions with chain A, Hydrophobic interactions: B:L.426, B:T.528, B:L.577, B:F.580, B:F.580, A:F.680, A:A.683, A:L.686, A:F.690 pi-Stacking: B:W.581, B:W.581, B:W.581, B:W.581 CLA.44: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.47: 13 residues within 4Å: Chain A: I.703, A.706 Chain B: S.419, H.420, S.422, W.423, L.426 Chain F: I.97 Ligands: PQN.45, CLA.78, CLA.79, CLA.97, CLA.98 9 PLIP interactions: 5 interactions with chain A, 1 interactions with chain F, 3 interactions with chain B, Hydrophobic interactions: A:I.703, A:I.703, A:A.706, F:I.97, B:W.423, B:L.426 pi-Cation interactions: A:H.707, A:H.707 Salt bridges: B:H.420 CLA.48: 14 residues within 4Å: Chain A: L.649, L.653 Chain B: L.623, F.649, H.653, W.656, Y.716, F.718, T.719, Y.720, F.723 Ligands: CLA.42, CLA.49, CLA.50 15 PLIP interactions: 3 interactions with chain A, 12 interactions with chain B, Hydrophobic interactions: A:L.649, A:L.649, A:L.653, B:L.623, B:F.649, B:W.656, B:Y.716, B:Y.720, B:F.723 Hydrogen bonds: B:Y.716, B:Y.720 pi-Stacking: B:F.649, B:H.653, B:H.653 Metal complexes: B:H.653 CLA.49: 16 residues within 4Å: Chain A: L.673, L.676, G.677, H.679, F.680 Chain B: L.433, V.437, F.580, W.581, N.584, W.588, L.615 Ligands: CLA.42, CLA.43, BCR.46, CLA.48 12 PLIP interactions: 4 interactions with chain A, 8 interactions with chain B, Hydrophobic interactions: A:L.673, A:L.676, A:H.679, A:F.680, B:L.433, B:V.437, B:W.581, B:W.581, B:N.584, B:L.615 pi-Stacking: B:W.588, B:W.588 CLA.50: 18 residues within 4Å: Chain A: F.454, I.458, T.462, F.543, W.600, N.603, I.645, Y.734 Chain B: W.647, L.650, F.651, H.653, L.654, A.657 Ligands: CLA.42, CLA.48, CLA.51, BCR.94 16 PLIP interactions: 9 interactions with chain A, 7 interactions with chain B, Hydrophobic interactions: A:F.454, A:I.458, A:I.458, A:T.462, A:F.543, A:W.600, A:W.600, A:I.645, A:Y.734, B:W.647, B:L.650, B:L.654, B:L.654, B:L.654, B:A.657 Salt bridges: B:H.653 CLA.51: 18 residues within 4Å: Chain A: N.443, C.446, F.451, I.551, L.596, F.599, W.600 Chain B: L.654, A.657, T.658, F.660, M.661, Y.669, W.670, L.673 Ligands: CLA.50, CLA.88, BCR.94 14 PLIP interactions: 9 interactions with chain A, 5 interactions with chain B, Hydrophobic interactions: A:F.451, A:I.551, A:L.596, A:F.599, B:L.654, B:A.657, B:T.658, B:F.660, B:M.661 Hydrogen bonds: A:F.451 pi-Stacking: A:W.600, A:W.600, A:W.600, A:W.600 CLA.52: 4 residues within 4Å: Chain B: I.24, A.27, H.28 Ligands: CLA.54 4 PLIP interactions: 4 interactions with chain B, Hydrophobic interactions: B:I.24 pi-Stacking: B:H.28, B:H.28, B:H.28 CLA.53: 16 residues within 4Å: Chain B: H.28, I.45, H.49, Q.52, L.53, I.329, H.330, Q.332, L.333, A.336, L.340 Ligands: CLA.54, CLA.60, CLA.71, CLA.76, CLA.89 10 PLIP interactions: 10 interactions with chain B, Hydrophobic interactions: B:H.28, B:I.45, B:I.45, B:H.49, B:I.329, B:Q.332, B:L.333, B:A.336 Salt bridges: B:H.49 pi-Cation interactions: B:H.49 CLA.54: 9 residues within 4Å: Chain B: H.28, I.56, W.59, I.381 Ligands: CLA.52, CLA.53, CLA.75, CLA.76, CLA.89 3 PLIP interactions: 3 interactions with chain B, Hydrophobic interactions: B:I.56, B:W.59, B:I.381 CLA.55: 12 residues within 4Å: Chain B: A.87, H.88, N.113, N.114, A.115, Y.116, S.117, W.645, M.648 Ligands: CLA.74, BCR.94, CLA.109 9 PLIP interactions: 9 interactions with chain B, Hydrophobic interactions: B:Y.116, B:W.645, B:W.645 Hydrogen bonds: B:Y.116, B:S.117, B:S.117 pi-Stacking: B:H.88 pi-Cation interactions: B:H.88 Metal complexes: B:H.88 CLA.56: 8 residues within 4Å: Chain A: T.462, L.466 Chain B: D.92, H.94, F.95, V.644, W.647 Ligands: BCR.94 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A, Hydrophobic interactions: B:D.92, B:W.647, B:W.647, A:L.466 pi-Stacking: B:F.95, B:F.95, B:W.647 Metal complexes: B:D.92 CLA.57: 14 residues within 4Å: Chain B: P.93, H.94 Chain H: G.41, L.45 Chain I: V.9, G.13, L.14 Chain L: P.69, A.83, G.86, L.87 Ligands: CLA.27, BCR.110, BCR.122 8 PLIP interactions: 1 interactions with chain H, 3 interactions with chain B, 2 interactions with chain L, 2 interactions with chain I, Hydrophobic interactions: H:L.45, B:P.93, L:A.83, L:L.87, I:V.9, I:L.14 pi-Stacking: B:H.94 Metal complexes: B:H.94 CLA.58: 8 residues within 4Å: Chain B: L.150, H.155, W.160, K.161, W.166 Chain G: N.36 Ligands: CLA.59, CLA.60 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain G, Hydrophobic interactions: B:L.150, B:W.160, B:W.166 Salt bridges: B:H.155 pi-Stacking: B:H.155, B:H.155 Hydrogen bonds: G:N.36 CLA.59: 13 residues within 4Å: Chain B: W.166, N.169, S.172, H.176, T.292, N.293, F.294 Chain G: Q.35, N.36, M.38 Ligands: CLA.58, CLA.60, CLA.67 9 PLIP interactions: 7 interactions with chain B, 2 interactions with chain G, Hydrophobic interactions: B:W.166, B:T.292, B:N.293, B:F.294, G:Q.35 Hydrogen bonds: B:S.172, G:N.36 pi-Cation interactions: B:H.176, B:H.176 CLA.60: 8 residues within 4Å: Chain B: H.49, R.173, H.177, L.181 Ligands: CLA.53, CLA.58, CLA.59, CLA.89 3 PLIP interactions: 3 interactions with chain B, Hydrophobic interactions: B:L.181 pi-Stacking: B:H.177, B:H.177 CLA.61: 8 residues within 4Å: Chain B: I.126, A.188, W.189, H.192, H.195, V.196, R.207, F.211 6 PLIP interactions: 6 interactions with chain B, Hydrophobic interactions: B:I.126, B:H.192, B:V.196 pi-Stacking: B:H.192, B:H.192 Metal complexes: B:H.192 CLA.62: 13 residues within 4Å: Chain B: V.194, H.195, F.211, L.212, L.215, Y.217, G.220, L.221, L.224, Y.232, I.253, L.254, L.277 9 PLIP interactions: 9 interactions with chain B, Hydrophobic interactions: B:V.194, B:L.212, B:L.221, B:L.221, B:L.224, B:I.253, B:L.254, B:L.277 Hydrogen bonds: B:L.215 CLA.63: 7 residues within 4Å: Chain B: N.230, L.254, H.274, L.277, A.278, W.492 Ligands: CLA.64 6 PLIP interactions: 6 interactions with chain B, Hydrophobic interactions: B:L.254, B:A.278, B:W.492 pi-Stacking: B:H.274, B:H.274 Metal complexes: B:H.274 CLA.64: 14 residues within 4Å: Chain B: I.256, L.267, V.272, H.274, H.275, A.278, I.279, H.350, L.354, W.496 Ligands: CLA.63, CLA.65, CLA.73, CLA.81 13 PLIP interactions: 13 interactions with chain B, Hydrophobic interactions: B:I.256, B:L.267, B:V.272, B:H.274, B:H.275, B:A.278, B:I.279, B:W.496, B:W.496 Hydrogen bonds: B:H.350 Salt bridges: B:H.350 pi-Cation interactions: B:H.275, B:H.275 CLA.65: 18 residues within 4Å: Chain B: W.122, T.125, I.126, F.182, S.185, S.186, W.189, L.193, V.272, H.275, H.276, I.279, L.346, V.347, M.351, A.356 Ligands: CLA.64, CLA.75 14 PLIP interactions: 14 interactions with chain B, Hydrophobic interactions: B:F.182, B:W.189, B:W.189, B:V.272, B:I.279, B:V.347, B:A.356 pi-Stacking: B:W.122, B:W.189, B:W.189, B:H.275, B:H.276, B:H.276 Metal complexes: B:H.276 CLA.66: 12 residues within 4Å: Chain B: F.182, L.282, F.283, I.285, M.289, Y.290, I.300, I.303 Ligands: CLA.68, CLA.70, CLA.71, CLA.90 6 PLIP interactions: 6 interactions with chain B, Hydrophobic interactions: B:F.182, B:L.282, B:F.283, B:F.283, B:F.283 Hydrogen bonds: B:Y.290 CLA.67: 9 residues within 4Å: Chain B: H.176, V.184, L.288, R.291, T.292, F.294 Chain G: L.15, F.18 Ligands: CLA.59 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain G, Hydrophobic interactions: B:V.184, B:L.288, B:F.294, G:L.15, G:F.18 Hydrogen bonds: B:T.292 CLA.68: 12 residues within 4Å: Chain B: I.285, G.286, L.288, M.289, Y.290, I.296, G.297, H.298 Chain G: Y.51 Ligands: CLA.66, CLA.69, CLA.129 8 PLIP interactions: 8 interactions with chain B, Hydrophobic interactions: B:I.285, B:L.288, B:M.289, B:I.296 Salt bridges: B:H.298 pi-Stacking: B:H.298, B:H.298, B:H.298 CLA.69: 9 residues within 4Å: Chain B: H.298, Y.302, A.306, H.307, P.309, P.310 Chain G: Y.51 Ligands: CLA.68, CLA.70 5 PLIP interactions: 5 interactions with chain B, Hydrophobic interactions: B:P.309, B:P.310 pi-Cation interactions: B:H.307, B:H.307 Metal complexes: B:H.307 CLA.70: 13 residues within 4Å: Chain B: I.303, H.307, P.309, P.310, R.316, V.406, L.407, M.410 Ligands: CLA.66, CLA.69, CLA.71, CLA.77, CLA.90 6 PLIP interactions: 6 interactions with chain B, Hydrophobic interactions: B:V.406, B:V.406, B:V.406, B:L.407 pi-Stacking: B:H.318, B:H.318 CLA.71: 15 residues within 4Å: Chain B: A.170, E.171, R.173, L.174, H.177, L.178, F.182, I.300, Y.322, I.325, N.326, L.340 Ligands: CLA.53, CLA.66, CLA.70 8 PLIP interactions: 8 interactions with chain B, Hydrophobic interactions: B:A.170, B:R.173, B:L.174, B:F.182, B:I.300, B:Y.322, B:I.325, B:I.325 CLA.72: 13 residues within 4Å: Chain B: S.345, L.346, Q.349, Q.375, M.382, F.386, L.526, T.529, T.530, M.582 Ligands: CLA.83, CLA.84, CLA.85 4 PLIP interactions: 4 interactions with chain B, Hydrophobic interactions: B:F.386, B:T.529, B:M.582 Hydrogen bonds: B:S.345 CLA.73: 7 residues within 4Å: Chain B: L.346, Q.349, H.350, S.353, L.354 Ligands: CLA.64, CLA.81 5 PLIP interactions: 5 interactions with chain B, Hydrophobic interactions: B:L.346, B:L.346 pi-Cation interactions: B:H.350, B:H.350 Metal complexes: B:H.350 CLA.74: 13 residues within 4Å: Chain B: W.59, Y.116, S.117, A.369, H.373, Y.376, I.377, I.717, F.718, A.721, I.725 Ligands: CLA.55, CLA.75 10 PLIP interactions: 10 interactions with chain B, Hydrophobic interactions: B:A.369, B:H.373, B:Y.376, B:I.377, B:F.718, B:A.721 pi-Stacking: B:H.373, B:H.373, B:H.373, B:H.373 CLA.75: 18 residues within 4Å: Chain B: W.59, S.117, V.119, W.122, L.340, I.343, T.344, V.347, M.351, Y.357, L.370, H.373, H.374, I.377, I.381 Ligands: CLA.54, CLA.65, CLA.74 17 PLIP interactions: 17 interactions with chain B, Hydrophobic interactions: B:W.59, B:W.59, B:V.119, B:W.122, B:L.340, B:I.343, B:T.344, B:V.347, B:V.347, B:I.377, B:I.377, B:I.381 Salt bridges: B:H.374 pi-Stacking: B:H.373, B:H.373 pi-Cation interactions: B:H.374 Metal complexes: B:H.374 CLA.76: 9 residues within 4Å: Chain B: H.28, L.333, L.337, F.380, G.384, H.388, F.575 Ligands: CLA.53, CLA.54 6 PLIP interactions: 6 interactions with chain B, Hydrophobic interactions: B:L.333, B:F.575 pi-Stacking: B:H.388, B:H.388, B:F.575 pi-Cation interactions: B:H.388 CLA.77: 9 residues within 4Å: Chain B: R.316, V.406, R.409, M.410, H.413, H.420 Ligands: CLA.70, CLA.78, CLA.90 9 PLIP interactions: 9 interactions with chain B, Hydrophobic interactions: B:V.406 Salt bridges: B:R.316, B:R.409, B:H.413 pi-Stacking: B:H.413, B:H.413, B:H.413, B:H.413 Metal complexes: B:H.413 CLA.78: 8 residues within 4Å: Chain A: W.705 Chain B: H.420, W.423 Chain F: L.144 Ligands: CLA.47, CLA.77, CLA.85, BCR.104 5 PLIP interactions: 5 interactions with chain B, Hydrophobic interactions: B:W.423, B:W.423 pi-Stacking: B:H.420, B:H.420 Metal complexes: B:H.420 CLA.79: 11 residues within 4Å: Chain B: W.423, L.426, F.427, F.430, H.431 Chain F: F.90, A.94, G.95, G.98 Ligands: CLA.47, CLA.80 11 PLIP interactions: 6 interactions with chain B, 5 interactions with chain F, Hydrophobic interactions: B:F.427, B:F.427, B:F.430, F:F.90, F:A.94 Salt bridges: B:H.431 pi-Stacking: B:H.431, B:H.431, F:F.90, F:F.90, F:F.90 CLA.80: 7 residues within 4Å: Chain B: G.434, L.435, V.437, H.438, M.442 Chain J: A.36 Ligands: CLA.79 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain J, Hydrophobic interactions: B:V.437, B:H.438, J:A.36 pi-Cation interactions: B:H.438, B:H.438 CLA.81: 8 residues within 4Å: Chain B: I.462, H.466, L.493, F.508 Ligands: CLA.64, CLA.73, CLA.82, CLA.83 5 PLIP interactions: 5 interactions with chain B, Hydrophobic interactions: B:I.462, B:F.508 pi-Cation interactions: B:H.466, B:H.466 Metal complexes: B:H.466 CLA.82: 10 residues within 4Å: Chain B: L.477, P.483, A.484, N.486, A.487, G.488, W.492 Ligands: CLA.81, CLA.105, CLA.127 1 PLIP interactions: 1 interactions with chain B, Hydrophobic interactions: B:A.487 CLA.83: 18 residues within 4Å: Chain B: Y.352, F.458, A.459, I.462, Q.463, H.466, F.508, L.509, I.511, H.519, I.522, V.589, Y.592, W.593 Ligands: CLA.72, CLA.81, CLA.84, CLA.85 12 PLIP interactions: 12 interactions with chain B, Hydrophobic interactions: B:F.458, B:A.459, B:I.462, B:I.462, B:L.509, B:I.522, B:V.589, B:Y.592 Hydrogen bonds: B:Q.460 pi-Stacking: B:H.519, B:H.519 Metal complexes: B:H.519 CLA.84: 15 residues within 4Å: Chain B: L.428, P.456, I.457, F.458, A.459, F.516, H.519, H.520, A.523, H.527 Chain F: F.83 Ligands: CLA.72, CLA.83, CLA.85, CLA.99 13 PLIP interactions: 12 interactions with chain B, 1 interactions with chain F, Hydrophobic interactions: B:L.428, B:L.428, B:I.457, B:F.458, B:F.458, B:F.516, F:F.83 Hydrogen bonds: B:F.458, B:A.459 Salt bridges: B:H.519 pi-Stacking: B:F.516 pi-Cation interactions: B:H.520, B:H.520 CLA.85: 10 residues within 4Å: Chain B: I.417, H.420, L.421, A.523, L.526, H.527 Ligands: CLA.72, CLA.78, CLA.83, CLA.84 5 PLIP interactions: 5 interactions with chain B, Hydrophobic interactions: B:I.417, B:L.421, B:L.421 pi-Stacking: B:H.527, B:H.527 CLA.86: 12 residues within 4Å: Chain A: S.440, N.443, W.444, I.447 Chain B: L.677, H.681 Ligands: CLA.26, CLA.87, PQN.93, BCR.94, CLA.119, BCR.122 4 PLIP interactions: 4 interactions with chain B, Hydrophobic interactions: B:H.681 Salt bridges: B:H.681 pi-Stacking: B:H.681, B:H.681 CLA.87: 13 residues within 4Å: Chain B: T.17, W.21, A.678, H.681, I.690, W.692, R.693, P.696, V.697 Chain I: M.21, F.25 Chain L: Y.98 Ligands: CLA.86 11 PLIP interactions: 10 interactions with chain B, 1 interactions with chain I, Hydrophobic interactions: B:T.17, B:W.21, B:W.21, B:A.678, B:W.692, B:W.692, B:W.692, B:P.696, B:P.696, I:F.25 Hydrogen bonds: B:R.693 CLA.88: 14 residues within 4Å: Chain B: F.651, L.654, V.655, T.658, M.661, F.662, V.707, V.710, H.711 Chain I: M.21 Ligands: CLA.51, PQN.93, BCR.94, BCR.110 10 PLIP interactions: 10 interactions with chain B, Hydrophobic interactions: B:F.651, B:L.654, B:V.655, B:T.658, B:F.662, B:F.662 Salt bridges: B:H.711 pi-Stacking: B:H.711, B:H.711 Metal complexes: B:H.711 CLA.89: 6 residues within 4Å: Chain B: I.56, F.57, L.181 Ligands: CLA.53, CLA.54, CLA.60 4 PLIP interactions: 4 interactions with chain B, Hydrophobic interactions: B:I.56, B:F.57, B:L.181, B:L.181 CLA.90: 7 residues within 4Å: Chain B: S.339, F.386, M.410, V.534 Ligands: CLA.66, CLA.70, CLA.77 2 PLIP interactions: 2 interactions with chain B, Hydrophobic interactions: B:F.386, B:V.534 CLA.91: 5 residues within 4Å: Chain B: P.309, P.310, G.311, G.312, R.313 3 PLIP interactions: 3 interactions with chain B, Hydrophobic interactions: B:P.309, B:P.310, B:R.313 CLA.97: 13 residues within 4Å: Chain A: T.47, I.50, W.51, I.700, H.707, P.718 Chain F: Y.104, L.105, E.118, I.119 Chain J: S.15 Ligands: PQN.45, CLA.47 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain F, Hydrophobic interactions: A:T.47, A:I.50, A:W.51, A:I.700, A:P.718, F:I.119 CLA.98: 5 residues within 4Å: Chain F: I.93, I.97, V.100, L.130 Ligands: CLA.47 4 PLIP interactions: 4 interactions with chain F, Hydrophobic interactions: F:I.93, F:I.93, F:V.100, F:L.130 CLA.99: 12 residues within 4Å: Chain B: F.458, W.461 Chain F: S.74, G.75, D.76, Q.77, W.80 Chain N: G.186, D.187 Ligands: CLA.84, CLA.100, BCR.104 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain N, Hydrophobic interactions: B:F.458, N:D.187 CLA.100: 2 residues within 4Å: Ligands: CLA.99, BCR.104 0 PLIP interactions: CLA.101: 1 residues within 4Å: Chain F: W.80 1 PLIP interactions: 1 interactions with chain F, Hydrophobic interactions: F:W.80 CLA.102: 1 residues within 4Å: Ligands: CLA.168 0 PLIP interactions: CLA.103: 3 residues within 4Å: Chain F: F.131, F.134 Ligands: CLA.111 4 PLIP interactions: 4 interactions with chain F, Hydrophobic interactions: F:F.134 pi-Stacking: F:F.131, F:F.131, F:F.131 CLA.105: 5 residues within 4Å: Chain B: A.487, I.491 Chain G: P.1, S.2 Ligands: CLA.82 1 PLIP interactions: 1 interactions with chain B, Hydrophobic interactions: B:I.491 CLA.106: 2 residues within 4Å: Chain G: R.25, P.60 2 PLIP interactions: 2 interactions with chain G, Hydrophobic interactions: G:P.60, G:P.60 CLA.107: 14 residues within 4Å: Chain H: N.13, S.14, Q.16 Chain L: W.31, Y.32, N.35, L.36, E.51, L.54, A.55, W.149 Ligands: CLA.108, CLA.119, CLA.121 8 PLIP interactions: 6 interactions with chain L, 2 interactions with chain H, Hydrophobic interactions: L:W.31, L:Y.32, L:N.35, L:L.36, L:L.54, L:W.149 Hydrogen bonds: H:S.14, H:Q.16 CLA.108: 3 residues within 4Å: Chain H: L.15, Q.16 Ligands: CLA.107 1 PLIP interactions: 1 interactions with chain H, Hydrophobic interactions: H:Q.16 CLA.109: 13 residues within 4Å: Chain B: L.58, G.62, F.65, W.69, A.89, W.91 Chain I: P.5, F.8, V.9, L.11, V.12 Ligands: CLA.55, BCR.110 12 PLIP interactions: 5 interactions with chain I, 7 interactions with chain B, Hydrophobic interactions: I:P.5, I:F.8, I:F.8, I:L.11, B:L.58, B:F.65, B:W.69, B:W.69 pi-Stacking: I:F.8 pi-Cation interactions: B:H.66, B:H.66, B:H.66 CLA.111: 2 residues within 4Å: Chain J: F.32 Ligands: CLA.103 0 PLIP interactions: CLA.112: 1 residues within 4Å: Chain J: S.21 0 PLIP interactions: CLA.113: 3 residues within 4Å: Chain J: E.28, R.31 Ligands: CLA.137 4 PLIP interactions: 4 interactions with chain J, Hydrophobic interactions: J:E.28 pi-Cation interactions: J:R.31, J:R.31, J:R.31 CLA.114: 5 residues within 4Å: Chain K: X.33, X.34, X.37, X.38 Ligands: CLA.13 0 PLIP interactions: CLA.115: 2 residues within 4Å: Ligands: CLA.29, CLA.116 0 PLIP interactions: CLA.116: 2 residues within 4Å: Chain K: X.18 Ligands: CLA.115 0 PLIP interactions: CLA.117: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.118: 12 residues within 4Å: Chain A: H.441, W.444 Chain B: T.684, P.685 Chain L: L.19, T.21, P.22, V.23, L.33 Ligands: CLA.25, CLA.32, CLA.121 7 PLIP interactions: 4 interactions with chain L, 3 interactions with chain A, Hydrophobic interactions: L:V.23, L:V.23, L:V.23, L:L.33, A:W.444 Salt bridges: A:H.441 pi-Cation interactions: A:H.441 CLA.119: 16 residues within 4Å: Chain B: L.686, A.687 Chain L: Y.32, L.36, P.37, E.51, V.52, A.55, H.56, L.59, L.60 Ligands: CLA.86, CLA.107, CLA.120, CLA.121, BCR.122 10 PLIP interactions: 8 interactions with chain L, 2 interactions with chain B, Hydrophobic interactions: L:L.36, L:V.52, L:L.59, L:L.59, L:L.60, B:L.686, B:A.687 pi-Stacking: L:H.56, L:H.56 Metal complexes: L:H.56 CLA.120: 8 residues within 4Å: Chain L: V.61, G.62, P.63, M.154, L.157, P.160, Y.161 Ligands: CLA.119 7 PLIP interactions: 7 interactions with chain L, Hydrophobic interactions: L:V.61, L:P.63, L:L.157, L:P.160, L:Y.161 Hydrogen bonds: L:Y.155 pi-Stacking: L:Y.161 CLA.121: 7 residues within 4Å: Chain L: L.28, Y.32 Ligands: CLA.31, CLA.32, CLA.107, CLA.118, CLA.119 1 PLIP interactions: 1 interactions with chain L, Hydrophobic interactions: L:Y.32 CLA.123: 3 residues within 4Å: Chain N: H.42, R.148 Ligands: CLA.165 4 PLIP interactions: 4 interactions with chain N, Hydrophobic interactions: N:R.148, N:R.148 pi-Stacking: N:H.42, N:H.42 CLA.124: 3 residues within 4Å: Chain N: S.38, W.45 Ligands: CLA.129 1 PLIP interactions: 1 interactions with chain N, Hydrophobic interactions: N:W.45 CLA.125: 7 residues within 4Å: Chain N: A.49, G.52, I.53, V.55, P.56, K.66 Ligands: CLA.126 4 PLIP interactions: 4 interactions with chain N, Hydrophobic interactions: N:I.53, N:V.55, N:P.56, N:P.56 CLA.126: 4 residues within 4Å: Chain N: K.66, Q.68, W.70 Ligands: CLA.125 0 PLIP interactions: CLA.127: 1 residues within 4Å: Ligands: CLA.82 0 PLIP interactions: CLA.128: 2 residues within 4Å: Chain N: V.104, E.105 3 PLIP interactions: 3 interactions with chain N, Hydrophobic interactions: N:V.104, N:E.105 Metal complexes: N:E.105 CLA.129: 5 residues within 4Å: Chain N: I.101, A.102, H.106 Ligands: CLA.68, CLA.124 6 PLIP interactions: 6 interactions with chain N, Hydrophobic interactions: N:I.101, N:A.102 pi-Cation interactions: N:H.106, N:H.106, N:H.106 Metal complexes: N:H.106 CLA.130: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.131: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain N, pi-Cation interactions: N:K.145 CLA.132: 1 residues within 4Å: Chain N: N.146 0 PLIP interactions: CLA.133: 7 residues within 4Å: Chain N: G.156, F.157, V.159, H.176, L.177, A.178 Ligands: CLA.134 4 PLIP interactions: 4 interactions with chain N, Hydrophobic interactions: N:F.157, N:F.157, N:V.159, N:H.176 CLA.134: 2 residues within 4Å: Chain N: H.176 Ligands: CLA.133 2 PLIP interactions: 2 interactions with chain N, pi-Cation interactions: N:H.176 Metal complexes: N:H.176 CLA.135: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.136: 5 residues within 4Å: Chain O: S.37, N.151, L.154, A.155, A.158 2 PLIP interactions: 2 interactions with chain O, Hydrophobic interactions: O:L.154, O:A.158 CLA.137: 1 residues within 4Å: Ligands: CLA.113 0 PLIP interactions: CLA.138: 2 residues within 4Å: Chain O: G.46, I.47 1 PLIP interactions: 1 interactions with chain O, Hydrophobic interactions: O:I.47 CLA.139: 1 residues within 4Å: Chain O: T.76 0 PLIP interactions: CLA.140: 2 residues within 4Å: Chain O: E.83, L.84 1 PLIP interactions: 1 interactions with chain O, Hydrophobic interactions: O:L.84 CLA.141: 1 residues within 4Å: Ligands: CLA.144 0 PLIP interactions: CLA.142: 3 residues within 4Å: Chain O: W.89, A.90, R.94 2 PLIP interactions: 2 interactions with chain O, Hydrophobic interactions: O:A.90, O:R.94 CLA.143: 5 residues within 4Å: Chain O: H.36, L.84, I.87, G.88, E.91 2 PLIP interactions: 2 interactions with chain O, Hydrophobic interactions: O:L.84, O:E.91 CLA.144: 1 residues within 4Å: Ligands: CLA.141 0 PLIP interactions: CLA.145: 3 residues within 4Å: Chain O: E.148 Ligands: CLA.146, CLA.149 0 PLIP interactions: CLA.146: 2 residues within 4Å: Chain O: I.149 Ligands: CLA.145 1 PLIP interactions: 1 interactions with chain O, Hydrophobic interactions: O:I.149 CLA.147: 5 residues within 4Å: Chain O: A.162, W.163, H.166, Y.168 Ligands: CLA.148 3 PLIP interactions: 3 interactions with chain O, Hydrophobic interactions: O:Y.168 pi-Stacking: O:H.166, O:H.166 CLA.148: 3 residues within 4Å: Chain O: L.181, A.182 Ligands: CLA.147 0 PLIP interactions: CLA.149: 2 residues within 4Å: Chain P: R.75 Ligands: CLA.145 0 PLIP interactions: CLA.150: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.151: 2 residues within 4Å: Chain P: V.132, K.133 0 PLIP interactions: CLA.152: 3 residues within 4Å: Chain P: M.14, L.143, F.146 5 PLIP interactions: 5 interactions with chain P, Hydrophobic interactions: P:M.14, P:L.143, P:F.146 pi-Stacking: P:F.146, P:F.146 CLA.153: 2 residues within 4Å: Chain P: G.10 Ligands: CLA.158 0 PLIP interactions: CLA.154: 5 residues within 4Å: Chain P: A.20, E.24, I.25, G.27, K.28 3 PLIP interactions: 3 interactions with chain P, Hydrophobic interactions: P:E.24, P:I.25 Metal complexes: P:E.24 CLA.155: 2 residues within 4Å: Chain P: D.57, E.65 0 PLIP interactions: CLA.156: 2 residues within 4Å: Chain P: V.63, M.66 0 PLIP interactions: CLA.157: 3 residues within 4Å: Chain P: F.12, L.15 Ligands: CLA.159 5 PLIP interactions: 5 interactions with chain P, Hydrophobic interactions: P:L.15 pi-Stacking: P:F.12, P:F.12, P:F.12, P:F.12 CLA.158: 1 residues within 4Å: Ligands: CLA.153 0 PLIP interactions: CLA.159: 3 residues within 4Å: Chain P: R.11 Ligands: CLA.157, CLA.160 0 PLIP interactions: CLA.160: 1 residues within 4Å: Ligands: CLA.159 0 PLIP interactions: CLA.161: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.162: 2 residues within 4Å: Chain P: Y.145, Q.148 4 PLIP interactions: 4 interactions with chain P, Hydrophobic interactions: P:Y.145, P:Q.148, P:Q.148 pi-Stacking: P:Y.145 CLA.163: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.164: 5 residues within 4Å: Chain Q: H.66, I.70, W.73 Ligands: CLA.165, CLA.173 5 PLIP interactions: 5 interactions with chain Q, Hydrophobic interactions: Q:I.70, Q:W.73, Q:W.73 pi-Stacking: Q:H.66, Q:H.66 CLA.165: 2 residues within 4Å: Ligands: CLA.123, CLA.164 0 PLIP interactions: CLA.166: 2 residues within 4Å: Chain Q: E.2, L.114 2 PLIP interactions: 2 interactions with chain Q, Hydrophobic interactions: Q:E.2, Q:L.114 CLA.167: 4 residues within 4Å: Chain Q: E.11, I.121, A.122, R.125 2 PLIP interactions: 2 interactions with chain Q, Hydrophobic interactions: Q:I.121, Q:R.125 CLA.168: 4 residues within 4Å: Chain Q: N.14, F.131 Ligands: CLA.102, CLA.173 0 PLIP interactions: CLA.169: 3 residues within 4Å: Chain Q: G.24, L.27, Y.43 3 PLIP interactions: 3 interactions with chain Q, Hydrophobic interactions: Q:L.27, Q:L.27, Q:Y.43 CLA.170: 5 residues within 4Å: Chain Q: K.41, W.42, L.57, F.62 Ligands: CLA.171 4 PLIP interactions: 4 interactions with chain Q, Hydrophobic interactions: Q:K.41, Q:L.57 pi-Stacking: Q:F.62, Q:F.62 CLA.171: 1 residues within 4Å: Ligands: CLA.170 0 PLIP interactions: CLA.172: 7 residues within 4Å: Chain Q: Q.9, R.16, R.72, D.75, S.81, P.86, I.87 8 PLIP interactions: 8 interactions with chain Q, Hydrophobic interactions: Q:Q.9, Q:R.16, Q:R.72, Q:D.75, Q:P.86, Q:I.87 pi-Cation interactions: Q:R.72, Q:R.72 CLA.173: 7 residues within 4Å: Chain Q: A.10, V.13, W.17, E.69, W.73 Ligands: CLA.164, CLA.168 6 PLIP interactions: 6 interactions with chain Q, Hydrophobic interactions: Q:A.10, Q:V.13, Q:W.17, Q:W.17 pi-Cation interactions: Q:R.72, Q:R.72 CLA.174: 4 residues within 4Å: Chain Q: R.16, M.19, L.20, D.85 3 PLIP interactions: 3 interactions with chain Q, Hydrophobic interactions: Q:L.20 pi-Cation interactions: Q:R.16, Q:R.16 CLA.175: 1 residues within 4Å: Chain Q: E.118 0 PLIP interactions: CLA.176: 2 residues within 4Å: Chain Q: N.123, L.126 1 PLIP interactions: 1 interactions with chain Q, Hydrophobic interactions: Q:L.126 CLA.177: 4 residues within 4Å: Chain Q: L.129, G.133, F.134, Q.137 2 PLIP interactions: 2 interactions with chain Q, Hydrophobic interactions: Q:L.129, Q:F.134 CLA.178: 3 residues within 4Å: Chain O: V.82 Chain Q: H.152, I.153 2 PLIP interactions: 1 interactions with chain Q, 1 interactions with chain O, pi-Stacking: Q:H.152 Hydrophobic interactions: O:V.82

2 x PQN: PHYLLOQUINONE(Non-covalent)

PQN.45: 12 residues within 4Å: Chain A: W.51, M.687, F.688, S.691, G.692, R.693, W.696, A.720, L.721 Ligands: CLA.33, CLA.47, CLA.97 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.688, A:F.688, A:R.693, A:W.696, A:W.696, A:L.721 Hydrogen bonds: A:S.691 pi-Stacking: A:W.696 PQN.93: 12 residues within 4Å: Chain B: M.661, F.662, S.665, W.666, R.667, W.670, A.698, L.699, A.704 Ligands: CLA.86, CLA.88, BCR.94 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:F.662, B:R.667, B:W.670, B:W.670, B:L.699, B:L.699, B:A.704 Hydrogen bonds: B:L.699 pi-Stacking: B:W.670

5 x BCR: BETA-CAROTENE(Non-covalent)

BCR.46: 11 residues within 4Å: Chain A: G.677, F.680, V.681, L.736, I.739, A.740, W.743 Chain B: F.430 Ligands: CLA.22, CLA.33, CLA.49 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.680, A:F.680, A:F.680, A:V.681, A:L.736, A:L.736, A:I.739, A:A.740, A:W.743, B:F.430 BCR.94: 11 residues within 4Å: Chain A: F.451 Chain B: W.647, M.648, F.651 Ligands: CLA.50, CLA.51, CLA.55, CLA.56, CLA.86, CLA.88, PQN.93 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:F.451, B:W.647, B:F.651, B:F.651, B:F.651 BCR.104: 6 residues within 4Å: Chain F: G.95, W.99, L.144 Ligands: CLA.78, CLA.99, CLA.100 1 PLIP interactions: 1 interactions with chain F Hydrophobic interactions: F:L.144 BCR.110: 8 residues within 4Å: Chain I: V.12, F.16, P.17 Ligands: CLA.27, CLA.57, CLA.88, CLA.109, BCR.122 2 PLIP interactions: 2 interactions with chain I Hydrophobic interactions: I:F.16, I:P.17 BCR.122: 8 residues within 4Å: Chain B: A.687 Chain I: L.14 Chain L: L.87 Ligands: CLA.26, CLA.57, CLA.86, BCR.110, CLA.119 3 PLIP interactions: 1 interactions with chain L, 1 interactions with chain I, 1 interactions with chain B Hydrophobic interactions: L:L.87, I:L.14, B:A.687

3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)(Covalent)

SF4.92: 12 residues within 4Å: Chain A: C.577, D.578, G.579, P.580, C.586 Chain B: C.558, D.559, G.560, P.561, T.566, C.567, W.666 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B, Metal complexes: A:C.577, A:C.586, B:C.558, B:C.567 SF4.95: 11 residues within 4Å: Chain C: C.20, T.22, D.23, V.24, C.47, V.48, G.49, C.50, K.51, R.52, C.53 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.20, C:C.47, C:V.48, C:C.53 SF4.96: 9 residues within 4Å: Chain C: T.9, C.10, I.11, G.12, C.13, C.16, V.17, C.57, P.58 1 PLIP interactions: 1 interactions with chain C, Metal complexes: C:C.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Amunts, A. et al., The structure of a plant photosystem I supercomplex at 3.4 A resolution. Nature (2007)

Release Date

2007-05-08

Peptides

Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II, chloroplast: D
Photosystem I reaction center subunit IV A, chloroplast: E
Photosystem I reaction center subunit III, chloroplast: F
Photosystem I reaction center subunit V, chloroplast: G
Photosystem I reaction center subunit VI, chloroplast: H
Photosystem I reaction center subunit VIII: I
Photosystem I reaction center subunit IX: J
Photosystem I reaction center subunit psaK, chloroplast: K
Photosystem I reaction center subunit XI, chloroplast: L
Photosystem I-N subunit: M
AT3g54890: N
Type II chlorophyll a/b binding protein from photosystem I: O
PSI type III chlorophyll a/b-binding protein: P
PSI light-harvesting antenna chlorophyll a/b-binding protein: Q

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
N

N
1

O
2

P
3

Q
4

Photosystem I P700 chlorophyll a apoprotein A1

Photosystem I P700 chlorophyll a apoprotein A2

Photosystem I iron-sulfur center

Photosystem I reaction center subunit II, chloroplast

Photosystem I reaction center subunit IV A, chloroplast

Photosystem I reaction center subunit III, chloroplast

Photosystem I reaction center subunit V, chloroplast

Photosystem I reaction center subunit VI, chloroplast

Photosystem I reaction center subunit VIII

Photosystem I reaction center subunit IX

Photosystem I reaction center subunit psaK, chloroplast

Photosystem I reaction center subunit XI, chloroplast

Photosystem I-N subunit

AT3g54890

Type II chlorophyll a/b binding protein from photosystem I

PSI type III chlorophyll a/b-binding protein

PSI light-harvesting antenna chlorophyll a/b-binding protein

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