SMTL ID : 2oiq.1 (1 other biounit)

Crystal Structure of chicken c-Src kinase domain in complex with the cancer drug imatinib.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x STI: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE(Non-covalent)

STI.1: 21 residues within 4Å: Chain A: L.26, V.34, A.46, I.47, K.48, E.63, V.66, M.67, L.70, I.89, T.91, Y.93, M.94, G.97, V.136, H.137, R.138, L.146, A.156, D.157, F.158 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.26, A:V.34, A:A.46, A:I.89, A:T.91, A:Y.93, A:L.146, A:D.157, A:F.158 Hydrogen bonds: A:E.63, A:T.91, A:T.91, A:M.94, A:D.157

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: E.270, D.271 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.274 GOL.3: 4 residues within 4Å: Chain A: K.180, V.214, P.217, G.218 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.218, A:M.219 Water bridges: A:K.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seeliger, M.A. et al., c-Src Binds to the Cancer Drug Imatinib with an Inactive Abl/c-Kit Conformation and a Distributed Thermodynamic Penalty. Structure (2007)

Release Date

2007-03-20

Peptides

Proto-oncogene tyrosine-protein kinase Src: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase Src

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