SMTL ID : 4ybj.1

Type II Dasatinib Analog Crystallized with c-Src Kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

homo-dimer

Ligands

2 x 4A9: 2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-N-(3-{[3-(trifluoromethyl)benzoyl]amino}phenyl)-1,3-thiazole-5-carboxamide(Non-covalent)

4A9.1: 28 residues within 4Å: Chain A: V.24, L.26, G.27, V.34, A.46, I.47, K.48, E.63, V.66, M.67, L.70, L.75, V.76, I.89, T.91, E.92, Y.93, M.94, S.95, K.96, G.97, Y.135, H.137, L.146, V.155, A.156, D.157, F.158 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.26, A:K.48, A:E.63, A:I.89, A:T.91, A:D.157 Hydrogen bonds: A:T.91, A:M.94, A:M.94, A:D.157 Water bridges: A:S.98 4A9.2: 25 residues within 4Å: Chain B: L.26, G.27, A.46, I.47, K.48, E.63, M.67, L.70, L.75, V.76, I.89, T.91, E.92, Y.93, M.94, S.95, K.96, G.97, Y.135, H.137, L.146, V.155, A.156, D.157, F.158 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:L.26, B:L.26, B:K.48, B:E.63, B:I.89, B:T.91, B:Y.93, B:D.157 Hydrogen bonds: B:E.63, B:T.91, B:Y.93, B:M.94, B:M.94, B:D.157 Water bridges: B:S.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kwarcinski, F.E. et al., Conformation-Selective Analogues of Dasatinib Reveal Insight into Kinase Inhibitor Binding and Selectivity. Acs Chem.Biol. (2016)

Release Date

2016-03-02

Peptides

Proto-oncogene tyrosine-protein kinase Src: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Proto-oncogene tyrosine-protein kinase Src

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