SMTL ID : 2pfg.1

Crystal structure of human CBR1 in complex with BiGF2.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: S.139, I.140, C.226, P.227, G.228 Ligands: NAP.2 Ligand excluded by PLIP

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 31 residues within 4Å: Chain A: G.11, N.13, K.14, G.15, I.16, R.37, R.41, L.61, D.62, I.63, D.64, N.89, A.90, G.91, I.92, T.112, V.137, S.138, S.139, Y.193, K.197, P.227, G.228, W.229, V.230, T.232, D.233, M.234, A.235 Ligands: CL.1, DDD.3 35 PLIP interactions: 35 interactions with chain A Hydrophobic interactions: A:P.227 Hydrogen bonds: A:G.11, A:G.11, A:N.13, A:N.13, A:K.14, A:I.16, A:R.37, A:D.62, A:I.63, A:D.64, A:N.89, A:G.91, A:K.197, A:V.230, A:V.230, A:D.233, A:M.234 Water bridges: A:K.14, A:K.14, A:K.14, A:K.14, A:K.14, A:G.17, A:R.37, A:R.37, A:R.37, A:R.37, A:N.89, A:T.112 Salt bridges: A:K.14, A:K.14, A:R.37, A:R.41 pi-Cation interactions: A:R.37

1 x DDD: (5R,10S)-5-{[(CARBOXYMETHYL)AMINO]CARBONYL}-7-OXO-3-THIA-1,6-DIAZABICYCLO[4.4.1]UNDECANE-10-CARBOXYLIC ACID(Non-covalent)

DDD.3: 10 residues within 4Å: Chain A: A.93, F.94, V.96, S.139, M.141, R.144, Y.193, W.229, M.234 Ligands: NAP.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.139, A:R.144, A:Y.193, A:Y.193 Water bridges: A:A.97, A:R.144 Salt bridges: A:R.144

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain A: K.156, E.166, L.170 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bateman, R. et al., Glutathione traps formaldehyde by formation of a bicyclo[4.4.1]undecane adduct. Org.Biomol.Chem. (2007)

Release Date

2007-09-25

Peptides

Carbonyl reductase [NADPH] 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonyl reductase [NADPH] 1

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