SMTL ID : 2phb.1

An Orally Efficacious Factor Xa Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: D.56, N.58, Q.61, E.66 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.66, H2O.2

1 x 230: (2R,4R)-N~1~-(4-CHLOROPHENYL)-N~2~-[2-FLUORO-4-(2-OXOPYRIDIN-1(2H)-YL)PHENYL]-4-METHOXYPYRROLIDINE-1,2-DICARBOXAMIDE(Non-covalent)

230.2: 19 residues within 4Å: Chain A: K.82, E.83, T.84, Y.85, F.162, D.179, A.180, C.181, V.203, S.204, W.205, G.206, E.207, G.208, C.209, R.211, G.216, I.217, Y.218 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.162, A:F.162, A:V.203, A:W.205, A:W.205 Hydrogen bonds: A:G.206, A:G.206, A:G.208, A:G.208 Water bridges: A:Y.85 pi-Stacking: A:Y.85, A:F.162, A:W.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kohrt, J.T. et al., The discovery of (2R,4R)-N-(4-chlorophenyl)-N- (2-fluoro-4-(2-oxopyridin-1(2H)-yl)phenyl)-4-methoxypyrrolidine-1,2-dicarboxamide (PD 0348292), an orally efficacious factor Xa inhibitor. Chem.Biol.Drug Des. (2007)

Release Date

2008-03-25

Peptides

Coagulation factor X, heavy chain: A
Coagulation factor X, light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coagulation factor X, heavy chain

Coagulation factor X, light chain

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