Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 2vf7.4
(4 other biounits)
Crystal structure of UvrA2 from Deinococcus radiodurans
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.30 Å
Oligo State
monomer
Ligands
2 x
ADP
:
ADENOSINE-5'-DIPHOSPHATE
(Non-covalent)
ADP.1:
13 residues within 4Å:
Chain A:
Y.370
,
R.375
,
N.511
,
N.512
,
V.531
,
G.533
,
S.534
,
G.535
,
K.536
,
S.537
,
T.538
,
Q.542
,
G.810
20
PLIP interactions
:
20 interactions with chain A
Hydrogen bonds:
A:Y.370
,
A:R.375
,
A:G.533
,
A:S.534
,
A:G.535
,
A:K.536
,
A:S.537
,
A:S.537
,
A:T.538
,
A:Q.542
Water bridges:
A:Y.370
,
A:G.372
,
A:R.375
,
A:R.375
,
A:R.375
,
A:K.536
,
A:E.811
Salt bridges:
A:K.536
pi-Cation interactions:
A:R.375
,
A:R.375
ADP.2:
15 residues within 4Å:
Chain A:
H.24
,
N.25
,
V.44
,
S.45
,
G.46
,
S.47
,
G.48
,
K.49
,
S.50
,
S.51
,
R.101
,
Y.721
,
L.722
,
Q.726
,
E.730
14
PLIP interactions
:
14 interactions with chain A
Hydrogen bonds:
A:G.46
,
A:S.47
,
A:G.48
,
A:K.49
,
A:S.50
,
A:S.50
,
A:S.51
,
A:S.51
,
A:R.101
,
A:R.101
,
A:Q.726
Salt bridges:
A:K.49
pi-Stacking:
A:H.24
,
A:H.24
2 x
ZN
:
ZINC ION
(Non-covalent)
ZN.3:
4 residues within 4Å:
Chain A:
C.151
,
C.154
,
C.287
,
C.290
4
PLIP interactions
:
4 interactions with chain A
Metal complexes:
A:C.151
,
A:C.154
,
A:C.287
,
A:C.290
ZN.4:
4 residues within 4Å:
Chain A:
C.641
,
C.644
,
C.664
,
C.667
4
PLIP interactions
:
4 interactions with chain A
Metal complexes:
A:C.641
,
A:C.644
,
A:C.664
,
A:C.667
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Timmins, J. et al., Structural and mutational analyses of Deinococcus radiodurans UvrA2 provide insight into DNA binding and damage recognition by UvrAs. Structure (2009)
Release Date
2008-12-16
Peptides
EXCINUCLEASE ABC, SUBUNIT A.:
A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
EXCINUCLEASE ABC, SUBUNIT A.
Related Entries With Identical Sequence
2vf7.1
|
2vf7.2
|
2vf7.3
|
2vf7.5
|
2vf8.1
|
2vf8.2
|
2vf8.3
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme