SMTL ID : 2w9n.1

crystal structure of linear di-ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: E.18 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.18, A:E.18 ZN.2: 2 residues within 4Å: Chain A: D.97, K.105 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.97, A:D.97, H2O.1, H2O.1 ZN.3: 1 residues within 4Å: Chain A: E.140 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.140, A:E.140 ZN.4: 3 residues within 4Å: Chain A: K.103, D.115, D.128 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.128

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 2 residues within 4Å: Chain A: D.21, K.29 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Komander, D. et al., Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains. Embo Rep. (2009)

Release Date

2009-04-28

Peptides

UBIQUITIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UBIQUITIN

Related Entries With Identical Sequence