SMTL ID : 2wev.2 (1 other biounit)

Truncation and Optimisation of Peptide Inhibitors of CDK2, Cyclin A Through Structure Guided Design

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ACE- ARG- ARG- B3L- MEA- NH2: ARG-ARG-B3L-MEA(Non-covalent)

ACE-ARG-ARG-B3L-MEA-NH2.1: 12 residues within 4Å: Chain B: M.38, I.41, W.45, E.48, R.78, L.81, Q.82, Y.108, I.109, T.110, D.111, T.113 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:I.41, B:R.78, B:L.81 Hydrogen bonds: B:E.48, B:R.78, B:Q.82, B:Q.82, B:I.109, B:D.111 Water bridges: B:D.44, B:D.44, B:W.45, B:R.78

1 x CK7: [4-(2-AMINO-4-METHYL-THIAZOL-5-YL)-PYRIMIDIN-2-YL]-(3-NITRO-PHENYL)-AMINE(Non-covalent)

CK7.2: 15 residues within 4Å: Chain A: I.10, G.11, E.12, G.13, A.31, K.33, F.80, E.81, L.83, H.84, Q.85, D.86, Q.131, L.134, D.145 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.10, A:A.31, A:F.80, A:L.134, A:L.134 Hydrogen bonds: A:K.33, A:L.83, A:L.83, A:Q.131, A:D.145, A:D.145 Water bridges: A:F.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kontopidis, G. et al., Truncation and Optimisation of Peptide Inhibitors of Cyclin-Dependent Kinase 2-Cyclin a Through Structure-Guided Design. Chemmedchem (2009)

Release Date

2009-06-09

Peptides

CELL DIVISION PROTEIN KINASE 2: A
CYCLIN-A2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

CELL DIVISION PROTEIN KINASE 2

CYCLIN-A2

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