SMTL ID : 8cur.1

Crystal structure of Cdk2 in complex with Cyclin A inhibitor 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x OW6: 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid(Non-covalent)

OW6.1: 27 residues within 4Å: Chain A: I.10, V.18, A.31, K.33, L.55, L.58, I.63, V.64, L.66, L.78, F.80, E.81, F.82, L.83, D.86, F.117, C.118, V.123, Q.131, N.132, L.134, L.143, A.144, D.145, F.146, G.147, L.148 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:V.18, A:A.31, A:L.58, A:I.63, A:F.80, A:F.80, A:F.80, A:V.123, A:L.134, A:A.144, A:F.146, A:F.146, A:F.146, A:F.146, A:L.148 Hydrogen bonds: A:L.83, A:D.145, A:D.145, A:F.146, A:L.148, A:A.149 Salt bridges: A:K.33 pi-Stacking: A:F.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tambo, C.S. et al., Biolayer Interferometry Assay for Cyclin-Dependent Kinase-Cyclin Association Reveals Diverse Effects of Cdk2 Inhibitors on Cyclin Binding Kinetics. Acs Chem.Biol. (2023)

Release Date

2023-04-05

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2

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