- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x FE: FE (III) ION(Non-covalent)
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 5 residues within 4Å:- Chain A: I.241, F.283
- Chain B: G.224, H.227, I.241
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:H.227
GOL.7: 5 residues within 4Å:- Chain C: I.241, F.283
- Chain D: G.224, H.227, I.241
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:H.227
GOL.11: 5 residues within 4Å:- Chain E: I.241, F.283
- Chain F: G.224, H.227, I.241
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:H.227
GOL.15: 5 residues within 4Å:- Chain G: I.241, F.283
- Chain H: G.224, H.227, I.241
1 PLIP interactions:1 interactions with chain H- Hydrogen bonds: H:H.227
- 4 x MBD: 3-METHYLCATECHOL(Non-covalent)
MBD.4: 10 residues within 4Å:- Chain B: Y.175, F.189, H.197, H.212, H.244, N.246, Y.253, L.294, L.298
- Ligands: FE.2
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:Y.175, B:F.189, B:L.294, B:L.298
- Hydrogen bonds: B:H.197, B:N.246, B:Y.253
- Water bridges: B:H.244, B:Y.253
- pi-Stacking: B:H.244
MBD.8: 10 residues within 4Å:- Chain D: Y.175, F.189, H.197, H.212, H.244, N.246, Y.253, L.294, L.298
- Ligands: FE.6
10 PLIP interactions:10 interactions with chain D- Hydrophobic interactions: D:Y.175, D:F.189, D:L.294, D:L.298
- Hydrogen bonds: D:H.197, D:N.246, D:Y.253
- Water bridges: D:H.244, D:Y.253
- pi-Stacking: D:H.244
MBD.12: 10 residues within 4Å:- Chain F: Y.175, F.189, H.197, H.212, H.244, N.246, Y.253, L.294, L.298
- Ligands: FE.10
10 PLIP interactions:10 interactions with chain F- Hydrophobic interactions: F:Y.175, F:F.189, F:L.294, F:L.298
- Hydrogen bonds: F:H.197, F:N.246, F:Y.253
- Water bridges: F:H.244, F:Y.253
- pi-Stacking: F:H.244
MBD.16: 10 residues within 4Å:- Chain H: Y.175, F.189, H.197, H.212, H.244, N.246, Y.253, L.294, L.298
- Ligands: FE.14
10 PLIP interactions:10 interactions with chain H- Hydrophobic interactions: H:Y.175, H:F.189, H:L.294, H:L.298
- Hydrogen bonds: H:H.197, H:N.246, H:Y.253
- Water bridges: H:H.244, H:Y.253
- pi-Stacking: H:H.244
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cho, H.J. et al., Substrate-Binding Mechanism of a Type I Extradiol Dioxygenase. J.Biol.Chem. (2010)
- Release Date
- 2010-09-01
- Peptides
- CATECHOL 2,3-DIOXYGENASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
DC
CD
DE
CF
DG
CH
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x FE: FE (III) ION(Non-covalent)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 4 x MBD: 3-METHYLCATECHOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cho, H.J. et al., Substrate-Binding Mechanism of a Type I Extradiol Dioxygenase. J.Biol.Chem. (2010)
- Release Date
- 2010-09-01
- Peptides
- CATECHOL 2,3-DIOXYGENASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
DC
CD
DE
CF
DG
CH
D