SMTL ID : 2x0y.1

Screening-based discovery of drug-like O-GlcNAcase inhibitor scaffolds

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

2 x X0T: 7-[(2S)-2,3-DIHYDROXYPROPYL]-1,3-DIMETHYL-3,7-DIHYDRO-1H-PURINE-2,6-DIONE(Non-covalent)

X0T.1: 16 residues within 4Å: Chain A: G.157, Y.159, K.188, Y.265, D.267, V.301, Y.305, T.336, V.340, W.364, N.366, V.369, D.371, Y.372, N.399 Chain B: L.593 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.157, A:K.188, A:N.366, A:N.399 pi-Stacking: A:W.364 X0T.2: 14 residues within 4Å: Chain B: G.157, Y.159, K.188, D.267, V.301, Y.305, T.336, W.364, N.366, V.369, D.371, Y.372, N.399, W.460 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.157, B:K.188, B:N.366, B:N.399 pi-Stacking: B:W.364

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dorfmueller, H.C. et al., Screening-Based Discovery of Drug-Like O-Glcnacase Inhibitor Scaffolds. FEBS Lett. (2010)

Release Date

2010-01-12

Peptides

O-GLCNACASE NAGJ: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

O-GLCNACASE NAGJ

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