- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x IK2: 4'-DEOXY-4'-ACETYLYAMINO-PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 4 residues within 4Å:- Chain A: H.60, R.63
- Chain B: E.140, A.143
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:E.140, B:E.140, A:H.60
EDO.3: 5 residues within 4Å:- Chain A: L.144, E.147, A.148, H.346, T.350
1 PLIP interactions:1 interactions with chain A- Water bridges: A:D.151
EDO.4: 6 residues within 4Å:- Chain A: P.241, P.250, A.251, L.256, L.289, L.388
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:A.251
EDO.5: 9 residues within 4Å:- Chain A: N.104, G.107, E.108, G.112, G.115, H.116, S.438
- Chain B: N.134, S.136
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:N.104, A:G.115, A:S.438, A:S.438, B:N.134
EDO.6: 5 residues within 4Å:- Chain A: D.53, N.54, Y.102, L.423, R.424
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.53, A:N.54, A:N.54
EDO.7: 7 residues within 4Å:- Chain B: F.50, D.53, N.54, Y.102, L.423, R.424
- Ligands: EDO.9
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:D.53, B:N.54, B:N.54, B:Y.102
EDO.9: 6 residues within 4Å:- Chain B: H.100, A.101, Y.102, L.423, G.426
- Ligands: EDO.7
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.101, B:A.101
EDO.10: 6 residues within 4Å:- Chain B: N.218, V.249, P.250, E.252, I.401, R.402
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.218, B:E.252, B:I.401
EDO.11: 6 residues within 4Å:- Chain A: G.305
- Chain B: L.133, N.134, N.338, I.339, L.340
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:N.134, B:N.338, B:I.339, B:L.340
- Water bridges: B:N.134, B:L.135
EDO.12: 4 residues within 4Å:- Chain A: E.147, C.150
- Chain B: R.66, S.67
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Water bridges: A:C.150, B:R.66
EDO.13: 5 residues within 4Å:- Chain B: G.190, A.200, G.246, A.404, R.408
1 PLIP interactions:1 interactions with chain B- Water bridges: B:R.408
EDO.14: 7 residues within 4Å:- Chain B: I.76, Y.109, Y.192, A.245, M.276, K.300
- Ligands: IK2.8
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.300
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wybenga, G.G. et al., Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase. J.Biol.Chem. (2012)
- Release Date
- 2012-05-30
- Peptides
- BETA-TRANSAMINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x IK2: 4'-DEOXY-4'-ACETYLYAMINO-PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wybenga, G.G. et al., Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase. J.Biol.Chem. (2012)
- Release Date
- 2012-05-30
- Peptides
- BETA-TRANSAMINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B