- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 7 residues within 4Å:- Chain A: T.166, G.195, L.196
- Chain B: E.167, M.171, H.331, A.332
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:T.166, A:T.166, A:G.195, A:L.196, B:H.331
EDO.4: 5 residues within 4Å:- Chain A: N.373, A.376, V.377, L.383, Q.384
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:L.383
EDO.5: 5 residues within 4Å:- Chain A: L.144, E.147, A.148, H.346, T.350
No protein-ligand interaction detected (PLIP)EDO.7: 7 residues within 4Å:- Chain A: E.167, M.171, H.331, A.332
- Chain B: T.166, G.195, L.196
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:T.166, B:G.195, B:L.196, A:H.331
EDO.9: 5 residues within 4Å:- Chain B: N.373, A.376, V.377, L.383, Q.384
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:L.383
EDO.10: 5 residues within 4Å:- Chain B: L.144, E.147, A.148, H.346, T.350
No protein-ligand interaction detected (PLIP)- 2 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)
AKG.3: 12 residues within 4Å:- Chain A: R.74, I.76, Y.109, Y.192, A.245, M.276, K.300, R.432
- Chain B: A.332, G.333, T.334
- Ligands: PLP.1
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Water bridges: A:Y.192
- Salt bridges: A:R.74, A:K.300, A:R.432
- Hydrogen bonds: B:G.333
AKG.8: 12 residues within 4Å:- Chain A: A.332, G.333, T.334
- Chain B: R.74, I.76, Y.109, Y.192, A.245, M.276, K.300, R.432
- Ligands: PLP.6
5 PLIP interactions:4 interactions with chain B, 1 interactions with chain A- Water bridges: B:Y.192
- Salt bridges: B:R.74, B:K.300, B:R.432
- Hydrogen bonds: A:G.333
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wybenga, G.G. et al., Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase. J.Biol.Chem. (2012)
- Release Date
- 2012-05-30
- Peptides
- BETA-TRANSAMINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wybenga, G.G. et al., Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase. J.Biol.Chem. (2012)
- Release Date
- 2012-05-30
- Peptides
- BETA-TRANSAMINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C