SMTL ID : 2z94.1

Complex structure of SARS-CoV 3C-like protease with TDT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.41, C.145 Ligands: TLD.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.41, A:C.145 ZN.3: 3 residues within 4Å: Chain B: H.41, C.145 Ligands: TLD.4 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.41, B:C.145

2 x TLD: 4-methylbenzene-1,2-dithiol(Non-covalent)

TLD.2: 4 residues within 4Å: Chain A: H.41, N.142, C.145 Ligands: ZN.1 No protein-ligand interaction detected (PLIP) TLD.4: 4 residues within 4Å: Chain B: H.41, N.142, C.145 Ligands: ZN.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, C.C. et al., Structural basis of mercury- and zinc-conjugated complexes as SARS-CoV 3C-like protease inhibitors. Febs Lett. (2007)

Release Date

2007-12-25

Peptides

Replicase polyprotein 1ab: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Replicase polyprotein 1ab

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