SMTL ID : 3b1m.1

Crystal structure of the PPARgamma-LBD complexed with a cercosporamide derivative modulator Cerco-A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x KRC: (9aS)-8-acetyl-N-[(2-ethylnaphthalen-1-yl)methyl]-1,7-dihydroxy-3-methoxy-9a-methyl-9-oxo-9,9a-dihydrodibenzo[b,d]furan-4-carboxamide(Non-covalent)

KRC.1: 16 residues within 4Å: Chain A: I.68, I.87, G.90, C.91, F.93, R.94, S.95, I.132, L.136, M.140, I.147, S.148, M.154, L.159, M.170, K.173 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.68, A:R.94, A:I.132, A:L.136, A:I.147 Water bridges: A:S.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wakabayashi, K. et al., Pharmacology and in Vitro Profiling of a Novel Peroxisome Proliferator-Activated Receptor gamma Ligand, Cerco-A. Biol.Pharm.Bull. (2011)

Release Date

2011-08-24

Peptides

Peroxisome proliferator-activated receptor gamma: A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

Peroxisome proliferator-activated receptor gamma coactivator 1-alpha

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