SMTL ID : 3cu7.2 (2 other biounits)

Human Complement Component 5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.11 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: N.909, N.911, I.922, V.924 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.741 No protein-ligand interaction detected (PLIP)

4 x CD: CADMIUM ION(Non-covalent)

CD.3: 3 residues within 4Å: Chain A: D.471, H.473, E.480 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.471, A:D.471, A:H.473, A:E.480, A:E.480 CD.4: 2 residues within 4Å: Chain A: D.264, H.753 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.264, A:H.753 CD.5: 2 residues within 4Å: Chain A: E.339, E.764 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.339, A:E.764, A:E.764 CD.6: 2 residues within 4Å: Chain A: Q.886, H.894 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.894

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fredslund, F. et al., Structure of and influence of a tick complement inhibitor on human complement component 5. Nat.Immunol. (2008)

Release Date

2008-06-10

Peptides

Complement C5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Complement C5

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