SMTL ID : 3kls.1 (1 other biounit)

Structure of complement C5 in complex with SSL7

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: N.911, I.922 No protein-ligand interaction detected (PLIP)

5 x CD: CADMIUM ION(Non-covalent)

CD.2: 2 residues within 4Å: Chain A: E.247, Q.298 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.247 CD.3: 3 residues within 4Å: Chain A: D.471, H.473, E.480 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.471, A:D.471, A:E.480, A:E.480 CD.4: 2 residues within 4Å: Chain A: D.264, H.753 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.264, A:H.753 CD.5: 2 residues within 4Å: Chain A: E.339, E.764 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.339, A:E.339, A:E.764, A:E.764 CD.6: 3 residues within 4Å: Chain A: Q.886, H.894, E.1589 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.894, A:E.1589, A:E.1589

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 1 residues within 4Å: Chain A: N.741 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laursen, N.S. et al., Structural basis for inhibition of complement C5 by the SSL7 protein from Staphylococcus aureus. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2009-11-24

Peptides

Complement C5: A
Exotoxin 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
X

Complement C5

Exotoxin 1

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