SMTL ID : 3km9.1 (1 other biounit)

Structure of complement C5 in complex with the C-terminal beta-grasp domain of SSL7

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 4.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: N.909, N.911, I.922 No protein-ligand interaction detected (PLIP)

3 x CD: CADMIUM ION(Non-covalent)

CD.2: 1 residues within 4Å: Chain A: E.247 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.247 CD.3: 5 residues within 4Å: Chain A: D.471, H.473, A.475, L.476, E.480 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.471, A:D.471, A:E.480, A:E.480 CD.4: 2 residues within 4Å: Chain A: D.264, H.753 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.264, A:H.753

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 1 residues within 4Å: Chain A: N.741 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.741

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laursen, N.S. et al., Structural basis for inhibition of complement C5 by the SSL7 protein from Staphylococcus aureus. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2009-12-01

Peptides

Complement C5: A
Staphylococcal enterotoxin-like toxin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
X

Complement C5

Staphylococcal enterotoxin-like toxin

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