SMTL ID : 3d28.1 (1 other biounit)

Crystal structure of hcv ns5b polymerase with a novel benzisothiazole inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x B34: (5S)-1-benzyl-3-(1,1-dioxido-1,2-benzisothiazol-3-yl)-4-hydroxy-5-(1-methylethyl)-1,5-dihydro-2H-pyrrol-2-one(Non-covalent)

B34.1: 15 residues within 4Å: Chain A: F.193, P.197, R.200, N.316, C.366, S.368, L.384, G.410, M.414, Y.415, Q.446, I.447, Y.448, G.449, S.556 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:N.316, A:L.384, A:M.414, A:Y.415 Hydrogen bonds: A:Y.448, A:G.449 Water bridges: A:S.556 pi-Stacking: A:F.193

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, S.H. et al., Structure-based design, synthesis, and biological evaluation of 1,1-dioxoisothiazole and benzo[b]thiophene-1,1-dioxide derivatives as novel inhibitors of hepatitis C virus NS5B polymerase. Bioorg.Med.Chem.Lett. (2008)

Release Date

2009-05-19

Peptides

RNA-directed RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase

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