- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-2-1-1-mer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 2 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
GTP.3: 22 residues within 4Å:- Chain A: G.10, Q.11, A.12, Q.15, A.99, A.100, N.101, S.140, G.143, G.144, T.145, G.146, I.171, T.179, E.183, N.206, Y.224, L.227, N.228
- Chain B: L.246, K.252
- Ligands: MG.2
22 PLIP interactions:20 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:Q.11, A:Q.11, A:A.12, A:A.100, A:A.100, A:N.101, A:S.140, A:G.144, A:T.145, A:G.146, A:T.179, A:T.179, A:E.183, A:N.206, A:Y.224, A:N.228, A:N.228, A:N.228
- pi-Stacking: A:Y.224, A:Y.224
- Salt bridges: B:K.252, B:K.252
GTP.9: 26 residues within 4Å:- Chain D: G.10, Q.11, A.12, Q.15, I.16, D.69, E.71, D.98, A.99, S.140, G.142, G.143, G.144, T.145, G.146, I.171, P.173, V.177, S.178, E.183, N.206, Y.224, N.228, I.231
- Chain E: K.252
- Ligands: MG.8
18 PLIP interactions:17 interactions with chain D, 1 interactions with chain E- Hydrogen bonds: D:Q.11, D:Q.11, D:A.12, D:D.98, D:S.140, D:G.144, D:T.145, D:G.146, D:S.178, D:E.183, D:N.206, D:N.206, D:Y.224, D:N.228, D:N.228
- pi-Stacking: D:Y.224, D:Y.224
- Salt bridges: E:K.252
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
GDP.4: 15 residues within 4Å:- Chain B: G.10, Q.11, C.12, Q.15, S.138, G.140, G.141, G.142, T.143, G.144, D.177, E.181, N.204, Y.222, N.226
16 PLIP interactions:16 interactions with chain B- Hydrogen bonds: B:Q.11, B:Q.11, B:C.12, B:S.138, B:G.142, B:T.143, B:T.143, B:T.143, B:T.143, B:D.177, B:E.181, B:N.204, B:Y.222, B:N.226, B:N.226, B:N.226
GDP.10: 17 residues within 4Å:- Chain E: G.10, Q.11, C.12, N.99, S.138, G.140, G.141, G.142, T.143, G.144, P.171, V.175, D.177, E.181, N.204, Y.222, N.226
17 PLIP interactions:17 interactions with chain E- Hydrogen bonds: E:Q.11, E:C.12, E:N.99, E:S.138, E:G.142, E:T.143, E:T.143, E:T.143, E:G.144, E:V.175, E:D.177, E:N.204, E:N.204, E:Y.222, E:N.226, E:N.226
- pi-Stacking: E:Y.222
- 1 x TA1: TAXOL(Non-covalent)
TA1.5: 19 residues within 4Å:- Chain B: E.22, V.23, D.26, E.27, L.215, D.224, H.227, L.228, A.231, S.234, F.270, P.272, L.273, T.274, S.275, R.276, P.358, R.359, G.360
13 PLIP interactions:13 interactions with chain B- Hydrophobic interactions: B:V.23, B:D.26, B:L.215, B:H.227, B:L.228, B:F.270, B:F.270, B:F.270, B:P.358
- Hydrogen bonds: B:T.274, B:P.358, B:G.360
- pi-Stacking: B:H.227
- 1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
ANP.7: 16 residues within 4Å:- Chain C: R.6, R.8, P.9, Q.91, T.92, G.93, S.94, G.95, K.96, T.97, H.98, L.104, S.209, S.210, G.237
- Ligands: MG.6
23 PLIP interactions:23 interactions with chain C- Hydrogen bonds: C:R.6, C:G.93, C:S.94, C:S.94, C:G.95, C:G.95, C:K.96, C:K.96, C:T.97, C:H.98, C:S.209, C:S.210, C:G.237
- Water bridges: C:R.6, C:R.6, C:R.6, C:N.11, C:R.198, C:R.198, C:S.209, C:S.209
- pi-Stacking: C:H.98, C:H.98
- 1 x CN2: 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE(Non-covalent)
CN2.11: 17 residues within 4Å:- Chain D: S.178, T.179, A.180, V.181
- Chain E: V.236, C.239, L.240, L.246, A.248, K.252, L.253, N.256, M.257, V.313, A.314, K.350, I.368
8 PLIP interactions:2 interactions with chain D, 6 interactions with chain E- Hydrogen bonds: D:S.178, D:V.181, E:N.256, E:K.350
- Hydrophobic interactions: E:A.248, E:K.252, E:L.253, E:N.256
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tan, D. et al., Structure of the kinesin13-microtubule ring complex. Structure (2008)
- Release Date
- 2009-01-20
- Peptides
- Tubulin alpha-1A chain: A
Beta tubulin: BE
Kinesin-like protein KIF2C: C
Tubulin alpha-1A chain: D - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BE
GC
DD
F
SMTL ID : 3edl.1 (1 other biounit)
Kinesin13-Microtubule Ring complex
Tubulin alpha-1A chain
Beta tubulin
Kinesin-like protein KIF2C
Tubulin alpha-1A chain
Related Entries With Identical Sequence
1ffx.1 | 1ia0.1 | 1jff.1 | 1sa0.1 | 1sa1.1 | 2hxf.1 | 2hxh.1 | 2p4n.1 | 2wbe.1 | 2wbe.2 | 3dco.1 | 3edl.2 | 3iz0.1 | 3j1t.1 | 3j1u.1 | 3j2u.1 | 3j2u.2 | 3j6p.1 | 3j7i.1 | 3jak.1 | 3jal.1 | 3jao.1 | 3jao.2 | 3jar.1 | 3jas.1 | 3jat.1 | 3jaw.1 | 4abo.1 | 4zhq.1 | 4zi7.1 more...less...4zol.1 | 5bmv.1 | 5fnv.1 | 5hnx.1 | 5hnz.1 | 5jqg.1 | 5nd2.1 | 5nd3.1 | 5nd7.1 | 5oam.1 | 5ocu.1 | 5ogc.1 | 6bjc.1 | 6cvj.1 | 6cvj.2 | 6cvn.1 | 6cvn.2 | 6dpu.1 | 6dpv.1 | 6dpw.1 | 6evx.1 | 6evy.1 | 6evz.1 | 6ew0.1 | 6mlq.1 | 6mlr.1 | 6mze.1 | 6mze.2 | 6mzf.1 | 6mzf.2 | 6mzg.1 | 6mzg.2 | 6o2q.1 | 6o2r.1 | 6o2s.14 | 6o2s.15 | 6o2s.16 | 6o2s.17 | 6o2s.18 | 6o2s.19 | 6o2s.20 | 6o2s.21 | 6o2s.22 | 6o2s.23 | 6o2s.24 | 6o2s.25 | 6o2s.26 | 6o2s.40 | 6o2s.41 | 6o2s.42 | 6o2s.43 | 6o2s.44 | 6o2s.45 | 6o2s.46 | 6o2s.47 | 6o2s.48 | 6o2s.49 | 6o2s.50 | 6o2s.51 | 6o2s.52 | 6o2s.66 | 6o2s.67 | 6o2s.68 | 6o2s.69 | 6o2s.70 | 6o2s.71 | 6o2s.72 | 6o2s.73 | 6o2s.74 | 6o2s.75 | 6o2s.76 | 6o2s.77 | 6o2s.78 | 6o2s.92 | 6o2s.93 | 6o2s.94 | 6o2s.95 | 6o2s.96 | 6o2s.97 | 6o2s.98 | 6o2s.99 | 6o2s.100 | 6o2s.101 | 6o2s.102 | 6o2s.103 | 6o2s.104 | 6o2t.14 | 6o2t.15 | 6o2t.16 | 6o2t.17 | 6o2t.18 | 6o2t.19 | 6o2t.20 | 6o2t.21 | 6o2t.22 | 6o2t.23 | 6o2t.24 | 6o2t.25 | 6o2t.26 | 6o2t.40 | 6o2t.41 | 6o2t.42 | 6o2t.43 | 6o2t.44 | 6o2t.45 | 6o2t.46 | 6o2t.47 | 6o2t.48 | 6o2t.49 | 6o2t.50 | 6o2t.51 | 6o2t.52 | 6o2t.66 | 6o2t.67 | 6o2t.68 | 6o2t.69 | 6o2t.70 | 6o2t.71 | 6o2t.72 | 6o2t.73 | 6o2t.74 | 6o2t.75 | 6o2t.76 | 6o2t.77 | 6o2t.78 | 6o2t.92 | 6o2t.93 | 6o2t.94 | 6o2t.95 | 6o2t.96 | 6o2t.97 | 6o2t.98 | 6o2t.99 | 6o2t.100 | 6o2t.101 | 6o2t.102 | 6o2t.103 | 6o2t.104 | 6vpo.1 | 6vpp.1 | 6y4m.1 | 6y4n.1 | 7dmz.1 | 7dn0.1 | 7emj.1 | 7exc.1 | 7l05.1 | 7nb8.1 | 7nba.1 | 7pqc.1 | 7pqp.1 | 7rs5.1 | 7rs6.1 | 7rx0.1 | 7sgs.1 | 7u0f.1 | 7u0f.2 | 7x4n.1 | 7ysn.1 | 7yso.1 | 7ysp.1 | 8qau.1 | 8rhb.1 | 8rhh.1 | 8rik.1 | 8riz.1 | 9gnq.1