SMTL ID : 3fco.1

Crystal Structure of 11beta-Hydroxysteroid Dehydrogenase 1 (11b-HSD1) in Complex with Benzamide Inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 29 residues within 4Å: Chain A: G.35, A.36, S.37, K.38, G.39, I.40, A.59, R.60, S.61, G.85, T.86, M.87, N.113, H.114, I.115, N.117, V.162, S.163, S.164, Y.177, K.181, L.209, G.210, L.211, I.212, T.214, T.216, A.217 Ligands: IIG.2 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:L.209 Hydrogen bonds: A:G.35, A:S.37, A:S.37, A:K.38, A:I.40, A:R.60, A:S.61, A:T.86, A:T.86, A:M.87, A:E.88, A:N.113, A:K.181, A:I.212, A:I.212, A:T.214, A:T.216 Water bridges: A:R.60, A:R.60, A:N.113 Salt bridges: A:K.38, A:R.60 NAP.3: 29 residues within 4Å: Chain B: G.35, A.36, S.37, K.38, G.39, I.40, G.41, A.59, R.60, S.61, G.85, T.86, M.87, N.113, H.114, I.115, V.162, S.163, S.164, Y.177, K.181, L.209, G.210, L.211, I.212, T.214, T.216, A.217 Ligands: IIG.4 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:L.209 Hydrogen bonds: B:G.35, B:S.37, B:S.37, B:K.38, B:I.40, B:G.41, B:R.60, B:S.61, B:T.86, B:T.86, B:M.87, B:N.113, B:N.113, B:I.115, B:K.181, B:I.212, B:T.214, B:T.214, B:T.214, B:T.216 Salt bridges: B:K.38, B:R.60

2 x IIG: N-cyclopropyl-N-(cis-4-cyclopropyl-4-hydroxycyclohexyl)-4-[(1S)-2,2,2-trifluoro-1-hydroxy-1-methylethyl]benzamide(Non-covalent)

IIG.2: 20 residues within 4Å: Chain A: T.118, S.119, L.120, S.164, A.166, Y.171, P.172, M.173, V.174, Y.177, L.209, G.210, L.211, T.216, A.217, A.220, M.227 Chain B: Y.274, R.282 Ligands: NAP.1 9 PLIP interactions: 2 interactions with chain B, 7 interactions with chain A Hydrogen bonds: B:Y.274, B:Y.274, A:S.164, A:Y.177 Hydrophobic interactions: A:T.118, A:Y.171, A:M.173, A:V.174, A:Y.177 IIG.4: 15 residues within 4Å: Chain A: M.280 Chain B: T.118, S.119, L.120, S.164, Y.171, P.172, Y.177, L.209, G.210, L.211, T.216, A.217, A.220 Ligands: NAP.3 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:T.118, B:Y.177 Hydrogen bonds: B:S.164, B:Y.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McMinn, D.L. et al., Optimization of novel di-substituted cyclohexylbenzamide derivatives as potent 11 beta-HSD1 inhibitors. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-12-01

Peptides

Corticosteroid 11-beta-dehydrogenase isozyme 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Corticosteroid 11-beta-dehydrogenase isozyme 1

Related Entries With Identical Sequence