SMTL ID : 3h6k.1 (1 other biounit)

Crystal Structure of Human 11-beta-hydroxysteroid-dehydrogenase Bound to an Ortho-chlro-sulfonyl-piperazine Inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 31 residues within 4Å: Chain A: G.35, A.36, S.37, K.38, G.39, I.40, A.59, R.60, S.61, G.85, T.86, M.87, E.88, N.113, H.114, I.115, N.117, Y.141, V.162, S.163, S.164, Y.177, K.181, L.209, G.210, L.211, I.212, T.214, T.216, A.217 Ligands: 33T.2 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:G.35, A:S.37, A:S.37, A:S.37, A:K.38, A:I.40, A:R.60, A:S.61, A:T.86, A:M.87, A:E.88, A:N.113, A:I.115, A:Y.141, A:S.164, A:K.181, A:I.212, A:T.214, A:T.216, A:T.216 Salt bridges: A:K.38, A:R.60 NAP.3: 27 residues within 4Å: Chain B: G.35, S.37, K.38, G.39, I.40, A.59, R.60, S.61, T.86, M.87, N.113, H.114, I.115, N.117, V.162, S.163, S.164, Y.177, K.181, L.209, G.210, L.211, I.212, T.214, T.216, A.217 Ligands: 33T.4 25 PLIP interactions: 25 interactions with chain B Hydrogen bonds: B:G.35, B:S.37, B:S.37, B:S.37, B:K.38, B:I.40, B:R.60, B:S.61, B:T.86, B:T.86, B:M.87, B:N.113, B:I.115, B:Y.141, B:S.164, B:Y.177, B:K.181, B:I.212, B:T.214, B:T.214, B:T.214, B:T.216 Water bridges: B:T.116 Salt bridges: B:K.38, B:R.60

2 x 33T: 3-chloro-4-({(2R)-4-[4-fluoro-2-(trifluoromethyl)phenyl]-2-methylpiperazin-1-yl}sulfonyl)benzamide(Non-covalent)

33T.2: 17 residues within 4Å: Chain A: I.115, T.118, S.119, L.120, S.164, L.165, A.166, Y.171, Y.177, L.209, G.210, L.211, T.216, A.220 Chain B: L.273, Y.274 Ligands: NAP.1 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:I.115, A:Y.171, B:Y.274 Hydrogen bonds: A:L.165, A:A.166, A:Y.171 33T.4: 18 residues within 4Å: Chain A: Y.274, S.277 Chain B: I.115, T.118, S.119, L.120, S.164, L.165, A.166, Y.171, V.174, Y.177, L.209, G.210, L.211, T.216, A.220 Ligands: NAP.3 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:I.115, B:L.165, B:Y.171 Hydrogen bonds: B:L.165, B:A.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wan, Z.K. et al., Efficacious 11beta-hydroxysteroid dehydrogenase type I inhibitors in the diet-induced obesity mouse model. J.Med.Chem. (2009)

Release Date

2009-12-01

Peptides

Corticosteroid 11-beta-dehydrogenase isozyme 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Corticosteroid 11-beta-dehydrogenase isozyme 1

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