SMTL ID : 3fo7.1

Simultaneous inhibition of anti-coagulation and inflammation: Crystal structure of phospholipase A2 complexed with indomethacin at 1.4 A resolution reveals the presence of the new common ligand binding site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.1, L.3, E.4, S.61, R.63 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.1, A:L.3, A:E.4 Water bridges: A:R.63 Salt bridges: A:R.63 SO4.2: 1 residues within 4Å: Chain A: R.42 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.42, A:R.42 Salt bridges: A:R.42 SO4.3: 2 residues within 4Å: Chain A: S.80, N.83 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.80, A:N.83 Water bridges: A:S.80 SO4.4: 3 residues within 4Å: Chain A: Y.103, S.104, K.105 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.105

1 x IMN: INDOMETHACIN(Non-covalent)

IMN.5: 7 residues within 4Å: Chain A: H.47, D.48, Y.51, P.55, C.57, P.59, K.60 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:D.48, A:K.60 Hydrogen bonds: A:D.48 Water bridges: A:H.47, A:D.48 Salt bridges: A:H.47, A:K.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, N. et al., Simultaneous inhibition of anti-coagulation and inflammation: Crystal structure of phospholipase A2 complexed with indomethacin at 1.4 A resolution reveals the presence of the new common ligand binding site. To be Published

Release Date

2009-01-20

Peptides

Phospholipase A2 VRV-PL-VIIIa: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipase A2 VRV-PL-VIIIa

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