SMTL ID : 3g86.2 (1 other biounit)

Hepatitis C virus polymerase NS5B (BK 1-570) with thiazine inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x T18: N-{3-[6-fluoro-1-(4-fluorobenzyl)-4-hydroxy-2-oxo-1,2-dihydroquinolin-3-yl]-1,1-dioxido-4H-1,4-benzothiazin-7-yl}methanesulfonamide(Non-covalent)

T18.1: 20 residues within 4Å: Chain A: F.199, P.203, R.206, S.294, N.297, N.322, G.323, D.324, C.372, S.374, L.390, G.416, N.417, M.420, Y.421, Q.452, I.453, Y.454, G.455, S.562 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:M.420, A:Y.421, A:Y.421 Hydrogen bonds: A:N.297, A:D.324, A:D.324, A:Q.452, A:Y.454 Water bridges: A:G.455 pi-Stacking: A:F.199

1 x NI: NICKEL (II) ION(Non-covalent)

NI.2: 1 residues within 4Å: Chain A: D.72 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.72, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Vicente, J. et al., Non-nucleoside inhibitors of HCV polymerase NS5B. Part 2: Synthesis and structure-activity relationships of benzothiazine-substituted quinolinediones. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-09-08

Peptides

RNA-directed RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

RNA-directed RNA polymerase

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