SMTL ID : 3hpg.1 (2 other biounits)

Visna virus integrase (residues 1-219) in complex with LEDGF IBD: examples of open integrase dimer-dimer interfaces

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.28 Å

Oligo State

hetero-4-4-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.12, H.16, C.40, C.43 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.12, A:H.16, A:C.40, A:C.43 ZN.2: 4 residues within 4Å: Chain B: H.12, H.16, C.40, C.43 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.12, B:H.16, B:C.40, B:C.43 ZN.3: 4 residues within 4Å: Chain C: H.12, H.16, C.40, C.43 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.12, C:H.16, C:C.40, C:C.43 ZN.4: 4 residues within 4Å: Chain D: H.12, H.16, C.40, C.43 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.12, D:H.16, D:C.40, D:C.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hare, S. et al., Structural basis for functional tetramerization of lentiviral integrase. Plos Pathog. (2009)

Release Date

2009-07-28

Peptides

Integrase: ABCD
PC4 and SFRS1-interacting protein: EFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

D
F

E
G

F
H

G
K

H
L

Integrase

PC4 and SFRS1-interacting protein

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