SMTL ID : 3i1f.2 (1 other biounit)

Gamma-subunit of the translation initiation factor 2 from S. solfataricus in complex with Gpp(CH2)p

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x GCP: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER(Non-covalent)

GCP.1: 9 residues within 4Å: Chain A: D.19, H.20, G.21, K.22, T.23, T.24, G.96, N.121, K.150 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:D.19, A:G.21, A:K.22, A:K.22, A:K.22, A:K.22, A:T.23, A:T.24, A:T.24, A:T.24, A:G.96, A:N.121 Salt bridges: A:K.150

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 2 residues within 4Å: Chain A: K.332, N.334 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.332 PO4.3: 5 residues within 4Å: Chain A: G.258, L.259, R.260, N.310, L.311 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.260, A:N.310, A:N.310 Water bridges: A:R.260

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stolboushkina, E.A. et al., 5-prime-triphosphate end of mRNA recognizes the second GTP-binding site on the gamma-subunit of the archaeal translation initiation factor 2. To be Published

Release Date

2010-06-30

Peptides

Translation initiation factor 2 subunit gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Translation initiation factor 2 subunit gamma

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