- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- monomer
- Ligands
- 4 x SSU- SSU- SSU- SSU- SSU- SSU: RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3')(Non-covalent)
- 17 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 1 residues within 4Å:- Chain A: R.241
Ligand excluded by PLIPSO4.6: 5 residues within 4Å:- Chain A: R.192, H.194, R.195, G.375, G.376
Ligand excluded by PLIPSO4.7: 4 residues within 4Å:- Chain A: K.298, H.323, K.326, H.327
Ligand excluded by PLIPSO4.8: 3 residues within 4Å:- Chain A: R.198, E.199, R.202
Ligand excluded by PLIPSO4.9: 3 residues within 4Å:- Chain A: R.77, E.113, H.117
Ligand excluded by PLIPSO4.10: 4 residues within 4Å:- Chain A: P.172, D.173, S.269, E.270
Ligand excluded by PLIPSO4.11: 4 residues within 4Å:- Chain A: R.24, R.128, L.129, G.130
Ligand excluded by PLIPSO4.12: 4 residues within 4Å:- Chain A: A.303, P.304, D.331, R.333
Ligand excluded by PLIPSO4.13: 2 residues within 4Å:- Chain A: R.195, E.199
Ligand excluded by PLIPSO4.14: 8 residues within 4Å:- Chain A: H.61, L.142, F.223, V.225, E.226, R.227
- Ligands: SSU-SSU-SSU-SSU-SSU-SSU.1, SSU-SSU-SSU-SSU-SSU-SSU.1
Ligand excluded by PLIPSO4.15: 5 residues within 4Å:- Chain A: R.202, T.237, H.238, H.240, R.241
Ligand excluded by PLIPSO4.16: 4 residues within 4Å:- Chain A: P.252, M.253, R.256
- Ligands: SSU-SSU-SSU-SSU-SSU-SSU.1
Ligand excluded by PLIPSO4.17: 5 residues within 4Å:- Chain A: H.293, T.294, E.295, R.320
- Ligands: SSU-SSU-SSU-SSU-SSU-SSU.1
Ligand excluded by PLIPSO4.18: 2 residues within 4Å:- Chain A: P.332, R.368
Ligand excluded by PLIPSO4.19: 4 residues within 4Å:- Chain A: Y.248, E.289, V.291, A.296
Ligand excluded by PLIPSO4.20: 2 residues within 4Å:- Chain A: M.1, R.2
Ligand excluded by PLIPSO4.23: 1 residues within 4Å:- Ligands: SSU-SSU-SSU.2
Ligand excluded by PLIP- 2 x ZN: ZINC ION(Non-covalent)
ZN.21: 6 residues within 4Å:- Chain A: D.63, H.64, D.162, H.400
- Ligands: SSU-SSU-SSU-SSU-SSU-SSU.1, ZN.22
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.63, A:H.64, A:D.162, A:H.400
ZN.22: 6 residues within 4Å:- Chain A: H.59, H.61, H.141, D.162
- Ligands: SSU-SSU-SSU-SSU-SSU-SSU.1, ZN.21
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.59, A:H.61, A:H.141, A:D.162
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishikawa, H. et al., Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog. To be Published
- Release Date
- 2010-07-28
- Peptides
- Ribonuclease TTHA0252: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- monomer
- Ligands
- 4 x SSU- SSU- SSU- SSU- SSU- SSU: RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3')(Non-covalent)
- 17 x SO4: SULFATE ION(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishikawa, H. et al., Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog. To be Published
- Release Date
- 2010-07-28
- Peptides
- Ribonuclease TTHA0252: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A