- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- monomer
- Ligands
- 2 x SSU- SSU- SSU- SSU: RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3')(Non-covalent)
- 19 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 2 residues within 4Å:- Chain A: P.243, R.244
Ligand excluded by PLIPSO4.4: 1 residues within 4Å:- Chain A: R.24
Ligand excluded by PLIPSO4.5: 2 residues within 4Å:- Chain A: R.84, R.263
Ligand excluded by PLIPSO4.6: 2 residues within 4Å:- Chain A: R.354
- Ligands: SO4.19
Ligand excluded by PLIPSO4.7: 8 residues within 4Å:- Chain A: Y.189, R.227, G.340, Y.341, S.378, G.379, H.380
- Ligands: SSU-SSU-SSU.2
Ligand excluded by PLIPSO4.8: 3 residues within 4Å:- Chain A: L.387, L.412, R.416
Ligand excluded by PLIPSO4.9: 4 residues within 4Å:- Chain A: R.24, R.128, L.129, G.130
Ligand excluded by PLIPSO4.10: 4 residues within 4Å:- Chain A: H.194, R.195, G.375, G.376
Ligand excluded by PLIPSO4.11: 4 residues within 4Å:- Chain A: V.371, H.372, T.373
- Ligands: SO4.12
Ligand excluded by PLIPSO4.12: 5 residues within 4Å:- Chain A: I.352, R.354, V.371
- Ligands: SO4.11, SO4.19
Ligand excluded by PLIPSO4.13: 4 residues within 4Å:- Chain A: P.172, D.173, S.269, E.270
Ligand excluded by PLIPSO4.14: 4 residues within 4Å:- Chain A: K.210, S.370, H.372
- Ligands: SO4.19
Ligand excluded by PLIPSO4.15: 4 residues within 4Å:- Chain A: T.294, R.320
- Ligands: SO4.16, SO4.24
Ligand excluded by PLIPSO4.16: 5 residues within 4Å:- Chain A: H.293, T.294, E.295, R.320
- Ligands: SO4.15
Ligand excluded by PLIPSO4.17: 2 residues within 4Å:- Chain A: R.359, L.361
Ligand excluded by PLIPSO4.18: 1 residues within 4Å:- Chain A: K.298
Ligand excluded by PLIPSO4.19: 7 residues within 4Å:- Chain A: R.354, A.369, S.370, V.371
- Ligands: SO4.6, SO4.12, SO4.14
Ligand excluded by PLIPSO4.20: 5 residues within 4Å:- Chain A: K.298, H.323, K.326, H.327, L.361
Ligand excluded by PLIPSO4.24: 4 residues within 4Å:- Chain A: G.312, S.313
- Ligands: SSU-SSU-SSU.2, SO4.15
Ligand excluded by PLIP- 1 x FLC: CITRATE ANION(Non-covalent)
- 2 x ZN: ZINC ION(Non-covalent)
ZN.22: 6 residues within 4Å:- Chain A: D.63, H.64, D.162, H.400
- Ligands: SSU-SSU-SSU.2, ZN.23
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:D.63, A:D.63, A:H.64, A:D.162, A:H.400
ZN.23: 6 residues within 4Å:- Chain A: H.59, H.61, H.141, D.162
- Ligands: SSU-SSU-SSU.2, ZN.22
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.59, A:H.61, A:H.141, A:D.162
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishikawa, H. et al., Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog. To be Published
- Release Date
- 2010-07-28
- Peptides
- Ribonuclease TTHA0252: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- monomer
- Ligands
- 2 x SSU- SSU- SSU- SSU: RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3')(Non-covalent)
- 19 x SO4: SULFATE ION(Non-functional Binders)
- 1 x FLC: CITRATE ANION(Non-covalent)
- 2 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishikawa, H. et al., Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog. To be Published
- Release Date
- 2010-07-28
- Peptides
- Ribonuclease TTHA0252: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B