SMTL ID : 3ijh.1 (1 other biounit)

Structure of S67-27 in Complex with Ko

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x KO2: prop-2-en-1-yl D-glycero-alpha-D-talo-oct-2-ulopyranosidonic acid(Non-covalent)

KO2.1: 13 residues within 4Å: Chain A: N.31, R.33, Y.38, S.97, N.98, R.101 Chain B: Y.33, F.50, R.52, K.56, I.102, P.104, E.111 11 PLIP interactions: 7 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:N.31, A:R.33, A:N.98, A:R.101, A:R.101, B:Y.33, B:E.111 Water bridges: A:N.98, A:L.100 Hydrophobic interactions: B:P.104 Salt bridges: B:R.52

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 1 residues within 4Å: Chain B: E.61 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brooks, C.L. et al., The role of CDR H3 in antibody recognition of a synthetic analog of a lipopolysaccharide antigen. Glycobiology (2010)

Release Date

2009-10-06

Peptides

Immunoglobulin light chain (IGG3): A
Immunoglobulin heavy chain (IGG3): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Immunoglobulin light chain (IGG3)

Immunoglobulin heavy chain (IGG3)

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