SMTL ID : 3kx2.2 (1 other biounit)

Crystal structure of Prp43p in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.123, E.216, S.382 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.123, H2O.2, H2O.2, H2O.3, H2O.3

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 15 residues within 4Å: Chain A: L.93, E.117, T.118, G.119, S.120, G.121, K.122, T.123, T.124, R.159, F.357, T.384, D.386, R.430 Ligands: MG.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:T.118, A:G.119, A:G.119, A:S.120, A:G.121, A:K.122, A:T.123, A:T.124, A:D.386 Water bridges: A:K.122, A:R.159, A:R.159, A:E.216, A:Q.354 Salt bridges: A:K.122 pi-Cation interactions: A:R.159

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, Y. et al., Structural basis for the function of DEAH helicases. Embo Rep. (2010)

Release Date

2010-01-26

Peptides

Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

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