SMTL ID : 3llp.2 (1 other biounit)

1.8 Angstrom human fascin 1 crystal structure

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: W.340, D.342, R.343, R.344, I.345, G.421, Y.423, F.452, F.453 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.344, A:F.453 GOL.2: 9 residues within 4Å: Chain A: K.379, L.380, I.381, N.382, R.383, P.384, L.416, F.418, Y.423 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.381, A:R.383, A:L.416 Water bridges: A:F.418

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.3: 7 residues within 4Å: Chain A: D.166, R.167, T.289, D.290, Q.291 Ligands: SO4.7, BR.8 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.289, A:D.290, A:Q.291, A:Q.291 Water bridges: A:D.168 Salt bridges: A:D.166, A:D.290

1 x K: POTASSIUM ION(Non-covalent)

K.4: 3 residues within 4Å: Chain A: T.275, R.276, G.278 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.275, A:R.276, A:G.278, H2O.4

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 4 residues within 4Å: Chain A: V.169, R.308, T.311, G.312 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.308 Salt bridges: A:R.308 SO4.6: 3 residues within 4Å: Chain A: R.82, E.83, V.84 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.83, A:V.84 Salt bridges: A:R.82 SO4.7: 4 residues within 4Å: Chain A: R.151, D.166, D.168 Ligands: EPE.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.166 Water bridges: A:R.151, A:D.166 Salt bridges: A:R.151

4 x BR: BROMIDE ION(Non-covalent)

BR.8: 4 residues within 4Å: Chain A: R.167, D.168, V.169 Ligands: EPE.3 Ligand excluded by PLIP BR.9: 5 residues within 4Å: Chain A: R.82, G.86, P.87, D.88, C.89 Ligand excluded by PLIP BR.10: 4 residues within 4Å: Chain A: R.229, Y.230, G.243, K.244 Ligand excluded by PLIP BR.11: 3 residues within 4Å: Chain A: Q.182, Q.184, R.185 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, L. et al., Migrastatin analogues target fascin to block tumour metastasis. Nature (2010)

Release Date

2010-04-07

Peptides

Fascin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Fascin

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